Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 8, Exons: 6, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04900:CDS:4 | 206 | Chr4: 2486218-2486423 | Arabidopsis thaliana |
AT4G04900:CDS:3 | 103 | Chr4: 2486946-2487048 | Arabidopsis thaliana |
AT4G04900:CDS:2 | 104 | Chr4: 2487168-2487271 | Arabidopsis thaliana |
AT4G04900:CDS:1 | 58 | Chr4: 2487722-2487779 | Arabidopsis thaliana |
AT4G04900:CDS:4.1 | 206 | Chr4: 2486218-2486423 | Arabidopsis thaliana |
AT4G04900:CDS:3.1 | 103 | Chr4: 2486946-2487048 | Arabidopsis thaliana |
AT4G04900:CDS:2.1 | 104 | Chr4: 2487168-2487271 | Arabidopsis thaliana |
AT4G04900:CDS:1.1 | 58 | Chr4: 2487722-2487779 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04900:exon:7 | 430 | Chr4: 2485994-2486423 | Arabidopsis thaliana |
AT4G04900:exon:2 | 215 | Chr4: 2487722-2487936 | Arabidopsis thaliana |
AT4G04900:exon:6 | 206 | Chr4: 2486218-2486423 | Arabidopsis thaliana |
AT4G04900:exon:5 | 103 | Chr4: 2486946-2487048 | Arabidopsis thaliana |
AT4G04900:exon:4 | 104 | Chr4: 2487168-2487271 | Arabidopsis thaliana |
AT4G04900:exon:3 | 91 | Chr4: 2487722-2487812 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04900:five_prime_UTR:2 | 157 | Chr4: 2487780-2487936 | Arabidopsis thaliana |
AT4G04900:five_prime_UTR:3 | 33 | Chr4: 2487780-2487812 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G04900 | locus:2135373 | RIC10 | ROP-interactive CRIB motif-containing protein 10 | 2618 | Chr4: 2485994-2488611 | A. thaliana | ROP-interactive CRIB motif-containing protein 10;(source:Araport11) | encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings. | ROP-interactive CRIB motif-containing protein 10 | RIC10 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE11610 | 261 | Chr4: 2487297-2487557 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE11610:transposon_fragment:1 | 261 | Chr4: 2487297-2487557 | Arabidopsis thaliana |