Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 16, Exons: 16, Five Prime UTR: 1, Gene: 1, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04040:CDS:1 | 199 | Chr4: 1939250-1939448 | Arabidopsis thaliana |
AT4G04040:CDS:2 | 162 | Chr4: 1939552-1939713 | Arabidopsis thaliana |
AT4G04040:CDS:3 | 122 | Chr4: 1939805-1939926 | Arabidopsis thaliana |
AT4G04040:CDS:4 | 54 | Chr4: 1940490-1940543 | Arabidopsis thaliana |
AT4G04040:CDS:5 | 107 | Chr4: 1940633-1940739 | Arabidopsis thaliana |
AT4G04040:CDS:6 | 106 | Chr4: 1940826-1940931 | Arabidopsis thaliana |
AT4G04040:CDS:7 | 64 | Chr4: 1941011-1941074 | Arabidopsis thaliana |
AT4G04040:CDS:8 | 89 | Chr4: 1941156-1941244 | Arabidopsis thaliana |
AT4G04040:CDS:9 | 132 | Chr4: 1941341-1941472 | Arabidopsis thaliana |
AT4G04040:CDS:10 | 171 | Chr4: 1941566-1941736 | Arabidopsis thaliana |
AT4G04040:CDS:11 | 116 | Chr4: 1941850-1941965 | Arabidopsis thaliana |
AT4G04040:CDS:12 | 112 | Chr4: 1942045-1942156 | Arabidopsis thaliana |
AT4G04040:CDS:13 | 85 | Chr4: 1942246-1942330 | Arabidopsis thaliana |
AT4G04040:CDS:14 | 45 | Chr4: 1942410-1942454 | Arabidopsis thaliana |
AT4G04040:CDS:15 | 69 | Chr4: 1942525-1942593 | Arabidopsis thaliana |
AT4G04040:CDS:16 | 77 | Chr4: 1942689-1942765 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04040:exon:1 | 336 | Chr4: 1939113-1939448 | Arabidopsis thaliana |
AT4G04040:exon:2 | 162 | Chr4: 1939552-1939713 | Arabidopsis thaliana |
AT4G04040:exon:3 | 122 | Chr4: 1939805-1939926 | Arabidopsis thaliana |
AT4G04040:exon:4 | 54 | Chr4: 1940490-1940543 | Arabidopsis thaliana |
AT4G04040:exon:5 | 107 | Chr4: 1940633-1940739 | Arabidopsis thaliana |
AT4G04040:exon:6 | 106 | Chr4: 1940826-1940931 | Arabidopsis thaliana |
AT4G04040:exon:7 | 64 | Chr4: 1941011-1941074 | Arabidopsis thaliana |
AT4G04040:exon:8 | 89 | Chr4: 1941156-1941244 | Arabidopsis thaliana |
AT4G04040:exon:9 | 132 | Chr4: 1941341-1941472 | Arabidopsis thaliana |
AT4G04040:exon:10 | 171 | Chr4: 1941566-1941736 | Arabidopsis thaliana |
AT4G04040:exon:11 | 116 | Chr4: 1941850-1941965 | Arabidopsis thaliana |
AT4G04040:exon:12 | 112 | Chr4: 1942045-1942156 | Arabidopsis thaliana |
AT4G04040:exon:13 | 85 | Chr4: 1942246-1942330 | Arabidopsis thaliana |
AT4G04040:exon:14 | 45 | Chr4: 1942410-1942454 | Arabidopsis thaliana |
AT4G04040:exon:15 | 69 | Chr4: 1942525-1942593 | Arabidopsis thaliana |
AT4G04040:exon:16 | 336 | Chr4: 1942689-1943024 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04040:five_prime_UTR:1 | 137 | Chr4: 1939113-1939249 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G04040 | locus:2136652 | MEE51 | maternal effect embryo arrest 51 | 3912 | Chr4: 1939113-1943024 | A. thaliana | Phosphofructokinase family protein;(source:Araport11) | Encodes a pyrophosphate-dependent phosphofructokinase B subunit (PFPbeta2). | Phosphofructokinase family protein | MEE51 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04040:three_prime_UTR:1 | 259 | Chr4: 1942766-1943024 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE09365 | 203 | Chr4: 1939990-1940192 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE09365:transposon_fragment:1 | 203 | Chr4: 1939990-1940192 | Arabidopsis thaliana |