Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exon: 1, Intergenic Regions: 2, mRNA: 1, Transposable Element: 1, Transposable Element Gene: 1, Transposon Fragments: 4
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G03650:exon:1 | 4579 | Chr4: 1619563-1624141 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr4_1618129..1619562 | 1434 | Chr4: 1618129-1619562 | Arabidopsis thaliana |
intergenic_region_chrChr4_1624142..1625145 | 1004 | Chr4: 1624142-1625145 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE08250 | 50 | Chr4: 1620998-1621047 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G03650 | locus:2140735 | AT4G03650 | 4579 | Chr4: 1619563-1624141 | A. thaliana | transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family, has a 1.3e-314 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica);(source:TAIR10) | NULL | transposable element gene | GP1 |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE08245:transposon_fragment:1 | 2839 | Chr4: 1618159-1620997 | Arabidopsis thaliana |
AT4TE08245:transposon_fragment:2 | 3113 | Chr4: 1621048-1624160 | Arabidopsis thaliana |
AT4TE08245:transposon_fragment:3 | 170 | Chr4: 1624151-1624320 | Arabidopsis thaliana |
AT4TE08250:transposon_fragment:1 | 50 | Chr4: 1620998-1621047 | Arabidopsis thaliana |