Genomics
Genome feature
| Region: |
exon
|
Length: |
507
 |
| Location: | Chr3:21083597-21084103 | ||
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G56960:CDS:8 |
289
|
Chr3: 21083597-21083885 | Arabidopsis thaliana |
| AT3G56960:CDS:8.1 |
289
|
Chr3: 21083597-21083885 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G56960:exon:11 |
824
|
Chr3: 21083597-21084420 | Arabidopsis thaliana |
| AT3G56970:exon:2 |
619
|
Chr3: 21084035-21084653 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT3G56960 | locus:2080585 | PIP5K4 | phosphatidyl inositol monophosphate 5 kinase 4 |
4464
|
Chr3: 21079957-21084420 | A. thaliana | phosphatidyl inositol monophosphate 5 kinase 4;(source:Araport11) | Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. | phosphatidyl inositol monophosphate 5 kinase 4 | PIP5K4 |
| AT3G56970 | locus:2080600 | bHLH38 | basic helix-loop-helix 38 |
1211
|
Chr3: 21084035-21085245 | A. thaliana | basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) | Encodes a member of the basic helix-loop-helix transcription factor family protein. bHLH IVc transcription factor repressed by bHLH11. | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | BHLH038, bHLH38, ORG2 |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT3G56960.1 |
3434
|
Chr3: 21079957-21084103 |
| AT3G56960.2 |
3804
|
Chr3: 21080028-21084420 |
| AT3G56970.1 |
1082
|
Chr3: 21084035-21085245 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G56960:three_prime_UTR:1 |
218
|
Chr3: 21083886-21084103 | Arabidopsis thaliana |
| AT3G56960:three_prime_UTR:2 |
535
|
Chr3: 21083886-21084420 | Arabidopsis thaliana |
| AT3G56970:three_prime_UTR:1 |
169
|
Chr3: 21084035-21084203 | Arabidopsis thaliana |
