Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56500:CDS:1 | 333 | Chr3: 20943638-20943970 | Arabidopsis thaliana |
AT3G56510:CDS:7 | 18 | Chr3: 20944348-20944365 | Arabidopsis thaliana |
AT3G56510:CDS:6 | 150 | Chr3: 20944796-20944945 | Arabidopsis thaliana |
AT3G56510:CDS:5 | 131 | Chr3: 20945193-20945323 | Arabidopsis thaliana |
AT3G56510:CDS:4 | 90 | Chr3: 20945413-20945502 | Arabidopsis thaliana |
AT3G56510:CDS:3 | 68 | Chr3: 20945595-20945662 | Arabidopsis thaliana |
AT3G56510:CDS:2 | 64 | Chr3: 20945806-20945869 | Arabidopsis thaliana |
AT3G56510:CDS:1 | 253 | Chr3: 20945983-20946235 | Arabidopsis thaliana |
AT3G56510:CDS:7.1 | 18 | Chr3: 20944348-20944365 | Arabidopsis thaliana |
AT3G56510:CDS:6.1 | 150 | Chr3: 20944796-20944945 | Arabidopsis thaliana |
AT3G56510:CDS:5.1 | 131 | Chr3: 20945193-20945323 | Arabidopsis thaliana |
AT3G56510:CDS:4.1 | 90 | Chr3: 20945413-20945502 | Arabidopsis thaliana |
AT3G56510:CDS:3.1 | 68 | Chr3: 20945595-20945662 | Arabidopsis thaliana |
AT3G56510:CDS:2.1 | 64 | Chr3: 20945806-20945869 | Arabidopsis thaliana |
AT3G56510:CDS:1.1 | 253 | Chr3: 20945983-20946235 | Arabidopsis thaliana |
AT3G56510:CDS:7.2 | 18 | Chr3: 20944348-20944365 | Arabidopsis thaliana |
AT3G56510:CDS:6.2 | 150 | Chr3: 20944796-20944945 | Arabidopsis thaliana |
AT3G56510:CDS:5.2 | 131 | Chr3: 20945193-20945323 | Arabidopsis thaliana |
AT3G56510:CDS:4.2 | 90 | Chr3: 20945413-20945502 | Arabidopsis thaliana |
AT3G56510:CDS:3.2 | 68 | Chr3: 20945595-20945662 | Arabidopsis thaliana |
AT3G56510:CDS:2.2 | 64 | Chr3: 20945806-20945869 | Arabidopsis thaliana |
AT3G56510:CDS:1.2 | 253 | Chr3: 20945983-20946235 | Arabidopsis thaliana |
AT3G56510:CDS:7.3 | 18 | Chr3: 20944348-20944365 | Arabidopsis thaliana |
AT3G56510:CDS:6.3 | 150 | Chr3: 20944796-20944945 | Arabidopsis thaliana |
AT3G56510:CDS:5.3 | 131 | Chr3: 20945193-20945323 | Arabidopsis thaliana |
AT3G56510:CDS:4.3 | 90 | Chr3: 20945413-20945502 | Arabidopsis thaliana |
AT3G56510:CDS:3.3 | 68 | Chr3: 20945595-20945662 | Arabidopsis thaliana |
AT3G56510:CDS:2.3 | 64 | Chr3: 20945806-20945869 | Arabidopsis thaliana |
AT3G56510:CDS:1.3 | 253 | Chr3: 20945983-20946235 | Arabidopsis thaliana |
AT3G56510:CDS:7.4 | 18 | Chr3: 20944348-20944365 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56500:exon:1 | 333 | Chr3: 20943638-20943970 | Arabidopsis thaliana |
AT3G56510:exon:2 | 84 | Chr3: 20946578-20946661 | Arabidopsis thaliana |
AT3G56510:exon:5 | 321 | Chr3: 20946356-20946676 | Arabidopsis thaliana |
AT3G56510:exon:3 | 478 | Chr3: 20946362-20946839 | Arabidopsis thaliana |
AT3G56510:exon:7 | 265 | Chr3: 20945983-20946247 | Arabidopsis thaliana |
AT3G56510:exon:1 | 262 | Chr3: 20946578-20946839 | Arabidopsis thaliana |
AT3G56510:exon:13 | 438 | Chr3: 20943928-20944365 | Arabidopsis thaliana |
AT3G56510:exon:12 | 150 | Chr3: 20944796-20944945 | Arabidopsis thaliana |
AT3G56510:exon:11 | 131 | Chr3: 20945193-20945323 | Arabidopsis thaliana |
AT3G56510:exon:10 | 90 | Chr3: 20945413-20945502 | Arabidopsis thaliana |
AT3G56510:exon:9 | 68 | Chr3: 20945595-20945662 | Arabidopsis thaliana |
AT3G56510:exon:8 | 64 | Chr3: 20945806-20945869 | Arabidopsis thaliana |
AT3G56510:exon:6 | 268 | Chr3: 20945983-20946250 | Arabidopsis thaliana |
AT3G56510:exon:4 | 484 | Chr3: 20946356-20946839 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56510:five_prime_UTR:2 | 84 | Chr3: 20946578-20946661 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:5 | 321 | Chr3: 20946356-20946676 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:3 | 478 | Chr3: 20946362-20946839 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:7 | 12 | Chr3: 20946236-20946247 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:1 | 262 | Chr3: 20946578-20946839 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:6 | 15 | Chr3: 20946236-20946250 | Arabidopsis thaliana |
AT3G56510:five_prime_UTR:4 | 484 | Chr3: 20946356-20946839 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G56500 | locus:2102574 | AT3G56500 | 333 | Chr3: 20943638-20943970 | A. thaliana | serine-rich protein-like protein;(source:Araport11) | NULL | serine-rich protein-related | ||
AT3G56510 | locus:2102594 | AT3G56510 | 2912 | Chr3: 20943928-20946839 | A. thaliana | RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) | Involved in regulation of seed longevity, positively regulated by E3 ligase ATL5. ATL5 promotes the polyubiquitination and degradation of the ABT1 protein posttranslationally. | RNA-binding (RRM/RBD/RNP motifs) family protein | ABT1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G56500.1 | 333 | Chr3: 20943638-20943970 |
AT3G56510.2 | 1293 | Chr3: 20943928-20946661 |
AT3G56510.5 | 1527 | Chr3: 20943928-20946676 |
AT3G56510.4 | 1684 | Chr3: 20943928-20946839 |
AT3G56510.1 | 1468 | Chr3: 20943928-20946839 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56510:three_prime_UTR:1 | 420 | Chr3: 20943928-20944347 | Arabidopsis thaliana |