Genomics
Transcript | Exons | Introns | ||
---|---|---|---|---|
AT3G55840.1
AT3G55840.1
1872 |
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55830:CDS:5 | 161 | Chr3: 20716973-20717133 | Arabidopsis thaliana |
AT3G55840:CDS:1 | 1287 | Chr3: 20717530-20718816 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55830:exon:5 | 471 | Chr3: 20716973-20717443 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55840:five_prime_UTR:1 | 50 | Chr3: 20718817-20718866 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G55830 | locus:2081983 | EPC1 | ECTOPICALLY PARTING CELLS | 2498 | Chr3: 20714946-20717443 | A. thaliana | Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) | A member of the Glycosyltransferase Family 64, homologous to Poplar cambium-expressed GT64 gene. The EPC1 protein plays a critical role during plant development in maintaining the integrity of organs via cell-cell adhesion, thereby providing mechanical strength and facilitating the movement of metabolites throughout the plant.Loss of function specifically affects glycosylinositolphosphorylceramide (GIPC) mannosylation. | Nucleotide-diphospho-sugar transferases superfamily protein | EPC1, GMT1 |
AT3G55840 | locus:2081988 | AT3G55840 | 1872 | Chr3: 20716995-20718866 | A. thaliana | Hs1pro-1 protein;(source:Araport11) | NULL | Hs1pro-1 protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G55830.1 | 1470 | Chr3: 20714946-20717443 |
AT3G55840.1 | 1872 | Chr3: 20716995-20718866 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55830:three_prime_UTR:1 | 310 | Chr3: 20717134-20717443 | Arabidopsis thaliana |
AT3G55840:three_prime_UTR:1 | 535 | Chr3: 20716995-20717529 | Arabidopsis thaliana |