Genomics
Transcript | Exons | Introns | ||||||
---|---|---|---|---|---|---|---|---|
AT3G55350.1
AT3G55350.1
1739 |
|
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55350:CDS:2 | 1031 | Chr3: 20519660-20520690 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55360:exon:4 | 325 | Chr3: 20520930-20521254 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G55350 | locus:2099901 | AT3G55350 | 2691 | Chr3: 20518266-20520956 | A. thaliana | PIF / Ping-Pong family of plant transposase;(source:Araport11) | NULL | PIF / Ping-Pong family of plant transposases | HARB1, HHP1 | |
AT3G55360 | locus:2099911 | CER10 | ECERIFERUM 10 | 2169 | Chr3: 20520930-20523098 | A. thaliana | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) | Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport as well as reduced trichome papillae. | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | ATTSC13, CER10, ECR, GLH6, TSC13 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G55350.1 | 1739 | Chr3: 20518266-20520956 |
AT3G55360.1 | 1431 | Chr3: 20520930-20523098 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55350:three_prime_UTR:1 | 266 | Chr3: 20520691-20520956 | Arabidopsis thaliana |
AT3G55360:three_prime_UTR:1 | 256 | Chr3: 20520930-20521185 | Arabidopsis thaliana |