Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
HRGP1
AT3G54590.1
2494 |
|
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HRGP1
AT3G54590.2
2401 |
|
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HRGP1
AT3G54590.3
2232 |
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54590:CDS:1 | 438 | Chr3: 20206223-20206660 | Arabidopsis thaliana |
AT3G54590:CDS:4 | 1662 | Chr3: 20206811-20208472 | Arabidopsis thaliana |
AT3G54590:CDS:1.1 | 438 | Chr3: 20206223-20206660 | Arabidopsis thaliana |
AT3G54590:CDS:3 | 1275 | Chr3: 20206811-20208085 | Arabidopsis thaliana |
AT3G54590:CDS:5 | 312 | Chr3: 20208161-20208472 | Arabidopsis thaliana |
AT3G54590:CDS:2 | 2232 | Chr3: 20206241-20208472 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54590:exon:1 | 533 | Chr3: 20206128-20206660 | Arabidopsis thaliana |
AT3G54590:exon:5 | 1961 | Chr3: 20206811-20208771 | Arabidopsis thaliana |
AT3G54590:exon:2 | 503 | Chr3: 20206158-20206660 | Arabidopsis thaliana |
AT3G54590:exon:4 | 1275 | Chr3: 20206811-20208085 | Arabidopsis thaliana |
AT3G54590:exon:6 | 623 | Chr3: 20208161-20208783 | Arabidopsis thaliana |
AT3G54590:exon:3 | 2232 | Chr3: 20206241-20208472 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54590:five_prime_UTR:1 | 95 | Chr3: 20206128-20206222 | Arabidopsis thaliana |
AT3G54590:five_prime_UTR:2 | 65 | Chr3: 20206158-20206222 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G54590 | locus:2096976 | HRGP1 | hydroxyproline-rich glycoprotein | 2656 | Chr3: 20206128-20208783 | A. thaliana | hydroxyproline-rich glycoprotein;(source:Araport11) | Encodes a hydroxyproline-rich glycoprotein. The mRNA is cell-to-cell mobile. | hydroxyproline-rich glycoprotein | ATHRGP1, EXT2, HRGP1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54590.1 | 2494 | Chr3: 20206128-20208771 |
AT3G54590.3 | 2232 | Chr3: 20206241-20208472 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54590:three_prime_UTR:1 | 299 | Chr3: 20208473-20208771 | Arabidopsis thaliana |
AT3G54590:three_prime_UTR:2 | 311 | Chr3: 20208473-20208783 | Arabidopsis thaliana |