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Gene : AT3G48860 A. thaliana

DB identifier  ? AT3G48860 Secondary Identifier  ? locus:2099423
Brief Description  coiled-coil protein
TAIR Computational Description  coiled-coil protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  NULL
TAIR Aliases  SCD2

1 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5576  
Location: Chr3:18117237-18122812

Gene models - AT3G48860 AT3G48860

? Gene models

Transcripts: 3  Exons: 47  Introns: 44 

Overlapping Features

? Genome features that overlap coordinates of this Gene

24 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCD2_ARATH function Involved in growth and development through its role in cytokinesis and polarized cell expansion. Required for plasma membrane internalization. May function in clathrin-mediated membrane trafficking, including plasma membrane endocytosis, essential to both cytokinesis and cell expansion.
SCD2_ARATH subcellular location Colocalized with clathrin at the plasma membrane.
SCD2_ARATH tissue specificity Expressed in the mature region of the primary root, tips of short, young lateral roots, guard cells in the epidermis of cotyledons and rosette leaves, the socket cells surrounding the base of trichomes and hydathodes of fully expanded rosette leaves.

3 Proteins

Function

Gene Ontology

cellular component
clathrin-coated vesicle  ? ECO  
plasma membrane  ? ECO  
molecular function
No terms in this category.
biological process
multidimensional cell growth  ? ECO  
cytokinesis by cell plate formation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets