Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 10, Exons: 10, Gene: 1, mRNA: 1, Three Prime UTRs: 5, Transposable Elements: 4, Transposon Fragments: 4
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G48770:CDS:5 | 4754 | Chr3: 18079261-18084014 | Arabidopsis thaliana |
AT3G48770:CDS:4 | 211 | Chr3: 18084107-18084317 | Arabidopsis thaliana |
AT3G48770:CDS:3 | 198 | Chr3: 18084790-18084987 | Arabidopsis thaliana |
AT3G48770:CDS:2 | 147 | Chr3: 18086133-18086279 | Arabidopsis thaliana |
AT3G48770:CDS:1 | 390 | Chr3: 18086428-18086817 | Arabidopsis thaliana |
AT3G48770:CDS:5.1 | 4754 | Chr3: 18079261-18084014 | Arabidopsis thaliana |
AT3G48770:CDS:4.1 | 211 | Chr3: 18084107-18084317 | Arabidopsis thaliana |
AT3G48770:CDS:3.1 | 198 | Chr3: 18084790-18084987 | Arabidopsis thaliana |
AT3G48770:CDS:2.1 | 147 | Chr3: 18086133-18086279 | Arabidopsis thaliana |
AT3G48770:CDS:1.1 | 390 | Chr3: 18086428-18086817 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G48770:exon:11 | 248 | Chr3: 18078452-18078699 | Arabidopsis thaliana |
AT3G48770:exon:2 | 401 | Chr3: 18086428-18086828 | Arabidopsis thaliana |
AT3G48770:exon:10 | 234 | Chr3: 18078466-18078699 | Arabidopsis thaliana |
AT3G48770:exon:9 | 97 | Chr3: 18078800-18078896 | Arabidopsis thaliana |
AT3G48770:exon:8 | 101 | Chr3: 18079066-18079166 | Arabidopsis thaliana |
AT3G48770:exon:7 | 4755 | Chr3: 18079260-18084014 | Arabidopsis thaliana |
AT3G48770:exon:6 | 211 | Chr3: 18084107-18084317 | Arabidopsis thaliana |
AT3G48770:exon:5 | 198 | Chr3: 18084790-18084987 | Arabidopsis thaliana |
AT3G48770:exon:4 | 147 | Chr3: 18086133-18086279 | Arabidopsis thaliana |
AT3G48770:exon:3 | 390 | Chr3: 18086428-18086817 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G48770 | locus:2099418 | AT3G48770 | 8963 | Chr3: 18078452-18087414 | A. thaliana | ATP/DNA binding protein;(source:Araport11) | NULL | DNA binding;ATP binding |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G48770:three_prime_UTR:5 | 248 | Chr3: 18078452-18078699 | Arabidopsis thaliana |
AT3G48770:three_prime_UTR:4 | 234 | Chr3: 18078466-18078699 | Arabidopsis thaliana |
AT3G48770:three_prime_UTR:3 | 97 | Chr3: 18078800-18078896 | Arabidopsis thaliana |
AT3G48770:three_prime_UTR:2 | 101 | Chr3: 18079066-18079166 | Arabidopsis thaliana |
AT3G48770:three_prime_UTR:1 | 1 | Chr3: 18079260-18079260 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE73320 | 639 | Chr3: 18085062-18085700 | Arabidopsis thaliana |
AT3TE73325 | 158 | Chr3: 18085701-18085858 | Arabidopsis thaliana |
AT3TE73330 | 303 | Chr3: 18085859-18086161 | Arabidopsis thaliana |
AT3TE73335 | 372 | Chr3: 18086394-18086765 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE73320:transposon_fragment:1 | 639 | Chr3: 18085062-18085700 | Arabidopsis thaliana |
AT3TE73325:transposon_fragment:1 | 158 | Chr3: 18085701-18085858 | Arabidopsis thaliana |
AT3TE73330:transposon_fragment:1 | 303 | Chr3: 18085859-18086161 | Arabidopsis thaliana |
AT3TE73335:transposon_fragment:1 | 372 | Chr3: 18086394-18086765 | Arabidopsis thaliana |