Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 4, Exons: 3, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G45540:CDS:4 | 199 | Chr3: 16706312-16706510 | Arabidopsis thaliana |
AT3G45540:CDS:3 | 761 | Chr3: 16706596-16707356 | Arabidopsis thaliana |
AT3G45540:CDS:4.1 | 199 | Chr3: 16706312-16706510 | Arabidopsis thaliana |
AT3G45540:CDS:2 | 764 | Chr3: 16706596-16707359 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G45540:exon:2 | 55 | Chr3: 16707506-16707560 | Arabidopsis thaliana |
AT3G45540:exon:4 | 199 | Chr3: 16706312-16706510 | Arabidopsis thaliana |
AT3G45540:exon:3 | 764 | Chr3: 16706596-16707359 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G45540:five_prime_UTR:2 | 3 | Chr3: 16707357-16707359 | Arabidopsis thaliana |
AT3G45540:five_prime_UTR:1 | 55 | Chr3: 16707506-16707560 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G45540 | locus:2085612 | AT3G45540 | 1338 | Chr3: 16706312-16707649 | A. thaliana | RING/U-box protein with C6HC-type zinc finger;(source:Araport11) | NULL | RING/U-box protein with C6HC-type zinc finger | RFA8 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE67680 | 321 | Chr3: 16706064-16706384 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE67680:transposon_fragment:1 | 321 | Chr3: 16706064-16706384 | Arabidopsis thaliana |