Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr3_14272240..14274221 | 1982 | Chr3: 14272240-14274221 | Arabidopsis thaliana |
intergenic_region_chrChr3_14274700..14275158 | 459 | Chr3: 14274700-14275158 | Arabidopsis thaliana |
intergenic_region_chrChr3_14281279..14282284 | 1006 | Chr3: 14281279-14282284 | Arabidopsis thaliana |
intergenic_region_chrChr3_14284707..14290247 | 5541 | Chr3: 14284707-14290247 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G42090.1 | 114 | Chr3: 14274222-14274699 |
AT3G42100.1 | 5259 | Chr3: 14275159-14281278 |
AT3G42110.1 | 1347 | Chr3: 14282285-14284706 |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G42090 | locus:2083901 | AT3G42090 | 478 | Chr3: 14274222-14274699 | A. thaliana | transposable_element_gene;(source:Araport11);contains domain LIN-9 RELATED (PTHR21689);(source:TAIR10) | NULL | transposable element gene | ||
AT3G42100 | locus:2083906 | AT3G42100 | 6120 | Chr3: 14275159-14281278 | A. thaliana | transposable_element_gene;(source:Araport11);similar to AT hook motif-containing protein-related [Arabidopsis thaliana] (TAIR:AT1G35940.1);(source:TAIR10) | NULL | transposable element gene | ||
AT3G42110 | locus:2083866 | AT3G42110 | 2422 | Chr3: 14282285-14284706 | A. thaliana | transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G35920.1);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE58655:transposon_fragment:1 | 12545 | Chr3: 14272908-14285452 | Arabidopsis thaliana |