Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons: 5, Gene: 1, Intergenic Regions: 2, mRNAs: 2, Three Prime UTR: 1, Transposable Element Gene: 1, Transposon Fragment: 1
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G30150:exon:4 | 177 | Chr3: 11782156-11782332 | Arabidopsis thaliana |
AT3G30150:exon:3 | 153 | Chr3: 11782441-11782593 | Arabidopsis thaliana |
AT3G30150:exon:2 | 123 | Chr3: 11782733-11782855 | Arabidopsis thaliana |
AT3G30150:exon:1 | 102 | Chr3: 11783011-11783112 | Arabidopsis thaliana |
AT3G30160:exon:5 | 349 | Chr3: 11783650-11783998 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G30160 | locus:2098792 | AT3G30160 | 1728 | Chr3: 11783650-11785377 | A. thaliana | transmembrane protein;(source:Araport11) | NULL | NULL |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr3_11778153..11782155 | 4003 | Chr3: 11778153-11782155 | Arabidopsis thaliana |
intergenic_region_chrChr3_11783113..11783649 | 537 | Chr3: 11783113-11783649 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G30150.1 | 555 | Chr3: 11782156-11783112 |
AT3G30160.1 | 838 | Chr3: 11783650-11785377 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G30160:three_prime_UTR:4 | 349 | Chr3: 11783650-11783998 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G30150 | locus:2098787 | AT3G30150 | 957 | Chr3: 11782156-11783112 | A. thaliana | transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G31990.1);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE49045:transposon_fragment:1 | 1692 | Chr3: 11782050-11783741 | Arabidopsis thaliana |