Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G23170:exon:1 | 1042 | Chr3: 8267920-8268961 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G23170 | locus:2086228 | AT3G23170 | 1042 | Chr3: 8267920-8268961 | A. thaliana | hypothetical protein;(source:Araport11) | PRP is a proline/serine rich protein of unknown function. It interacts with defense related MAP kinase MPK6 and others. It's expression is induced by PAMP elicitors. May play a role in response to pathogens. EIN3 and RAP2.2 are required to fully activate HRM1 expression under hypoxia. | NULL | HRM1, HUP39, PRP |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr3_8266586..8267919 | 1334 | Chr3: 8266586-8267919 | Arabidopsis thaliana |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G23170:three_prime_UTR:1 | 345 | Chr3: 8267920-8268264 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE34685 | 80 | Chr3: 8267876-8267955 | Arabidopsis thaliana |