Genomics
Transcript | Exons | Introns | ||||||
---|---|---|---|---|---|---|---|---|
ATA20
AT3G15400.1
1576 |
|
|||||||
ATA20
AT3G15400.2
1500 |
|
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G15400:CDS:2 | 1251 | Chr3: 5201678-5202928 | Arabidopsis thaliana |
AT3G15400:CDS:1 | 295 | Chr3: 5201678-5201972 | Arabidopsis thaliana |
AT3G15400:CDS:3 | 902 | Chr3: 5202027-5202928 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G15400:exon:2 | 329 | Chr3: 5201644-5201972 | Arabidopsis thaliana |
AT3G15400:exon:3 | 1171 | Chr3: 5202027-5203197 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G15400:five_prime_UTR:1 | 56 | Chr3: 5201622-5201677 | Arabidopsis thaliana |
AT3G15400:five_prime_UTR:2 | 34 | Chr3: 5201644-5201677 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G15400 | locus:2090191 | ATA20 | anther 20 | 1576 | Chr3: 5201622-5203197 | A. thaliana | anther 20;(source:Araport11) | Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. DYT1 and bHLH089 specifically recognize the TCATGTGC box to activate expression. | anther 20 | ATA20 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G15400.1 | 1576 | Chr3: 5201622-5203197 |
AT3G15400.2 | 1500 | Chr3: 5201644-5203197 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G15400:three_prime_UTR:1 | 269 | Chr3: 5202929-5203197 | Arabidopsis thaliana |