Genomics
Gene models -
Gene models
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Overlapping Features
Genome features that overlap coordinates of this FivePrimeUTR
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11240:CDS:1 | 145 | Chr3: 3520948-3521092 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11240:exon:3 | 361 | Chr3: 3520770-3521130 | Arabidopsis thaliana |
AT3G11240:exon:2 | 419 | Chr3: 3520770-3521188 | Arabidopsis thaliana |
AT3G11240:exon:1 | 241 | Chr3: 3520948-3521188 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11240:five_prime_UTR:4 | 361 | Chr3: 3520770-3521130 | Arabidopsis thaliana |
AT3G11240:five_prime_UTR:1 | 96 | Chr3: 3521093-3521188 | Arabidopsis thaliana |
AT3G11240:five_prime_UTR:2 | 241 | Chr3: 3520948-3521188 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G11240 | locus:2074718 | ATE2 | arginine-tRNA protein transferase 2 | 2717 | Chr3: 3518472-3521188 | A. thaliana | arginine-tRNA protein transferase 2;(source:Araport11) | Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. ATE2 has also been show to be involved in the response to pathogens. | arginine-tRNA protein transferase 2 | ATATE2, ATE2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G11240.2 | 2314 | Chr3: 3518472-3521130 |
AT3G11240.1 | 2096 | Chr3: 3518483-3521188 |
AT3G11240.3 | 2235 | Chr3: 3518483-3521188 |
AT3G11240.4 | 2222 | Chr3: 3518483-3521188 |