Genomics
Genome feature
| Region: |
mRNA
|
Length: |
2547
 |
| Location: | Chr3:3267825-3271202 | ||
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G10490:CDS:3 |
198
|
Chr3: 3268800-3268997 | Arabidopsis thaliana |
| AT3G10490:CDS:4 |
186
|
Chr3: 3269078-3269263 | Arabidopsis thaliana |
| AT3G10490:CDS:6 |
672
|
Chr3: 3269937-3270608 | Arabidopsis thaliana |
| AT3G10490:CDS:1 |
220
|
Chr3: 3268075-3268294 | Arabidopsis thaliana |
| AT3G10490:CDS:2 |
278
|
Chr3: 3268720-3268997 | Arabidopsis thaliana |
| AT3G10490:CDS:4.1 |
186
|
Chr3: 3269078-3269263 | Arabidopsis thaliana |
| AT3G10490:CDS:6.1 |
672
|
Chr3: 3269937-3270608 | Arabidopsis thaliana |
| AT3G10490:CDS:1.1 |
220
|
Chr3: 3268075-3268294 | Arabidopsis thaliana |
| AT3G10490:CDS:2.1 |
278
|
Chr3: 3268720-3268997 | Arabidopsis thaliana |
| AT3G10490:CDS:4.2 |
186
|
Chr3: 3269078-3269263 | Arabidopsis thaliana |
| AT3G10490:CDS:5 |
33
|
Chr3: 3269894-3269926 | Arabidopsis thaliana |
| AT3G10490:CDS:3.1 |
198
|
Chr3: 3268800-3268997 | Arabidopsis thaliana |
| AT3G10490:CDS:4.3 |
186
|
Chr3: 3269078-3269263 | Arabidopsis thaliana |
| AT3G10490:CDS:6.2 |
672
|
Chr3: 3269937-3270608 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G10490:exon:4 |
987
|
Chr3: 3268011-3268997 | Arabidopsis thaliana |
| AT3G10490:exon:1 |
108
|
Chr3: 3267825-3267932 | Arabidopsis thaliana |
| AT3G10490:exon:10 |
1266
|
Chr3: 3269937-3271202 | Arabidopsis thaliana |
| AT3G10490:exon:2 |
54
|
Chr3: 3267879-3267932 | Arabidopsis thaliana |
| AT3G10490:exon:3 |
284
|
Chr3: 3268011-3268294 | Arabidopsis thaliana |
| AT3G10490:exon:6 |
278
|
Chr3: 3268720-3268997 | Arabidopsis thaliana |
| AT3G10490:exon:8 |
990
|
Chr3: 3269894-3270883 | Arabidopsis thaliana |
| AT3G10490:exon:5 |
432
|
Chr3: 3268566-3268997 | Arabidopsis thaliana |
| AT3G10490:exon:7 |
186
|
Chr3: 3269078-3269263 | Arabidopsis thaliana |
| AT3G10490:exon:9 |
995
|
Chr3: 3269937-3270931 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G10490:five_prime_UTR:4 |
789
|
Chr3: 3268011-3268799 | Arabidopsis thaliana |
| AT3G10490:five_prime_UTR:1 |
108
|
Chr3: 3267825-3267932 | Arabidopsis thaliana |
| AT3G10490:five_prime_UTR:2 |
54
|
Chr3: 3267879-3267932 | Arabidopsis thaliana |
| AT3G10490:five_prime_UTR:3 |
64
|
Chr3: 3268011-3268074 | Arabidopsis thaliana |
| AT3G10490:five_prime_UTR:5 |
234
|
Chr3: 3268566-3268799 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT3G10490 | locus:2075835 | NAC052 | NAC domain containing protein 52 |
3378
|
Chr3: 3267825-3271202 | A. thaliana | NAC domain containing protein 52;(source:Araport11) | Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control. | NAC domain containing protein 52 | ANAC051, ANAC052, NAC052, SGS1 |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT3G10490.2 |
2122
|
Chr3: 3267825-3271202 |
| AT3G10490.1 |
1792
|
Chr3: 3267879-3270883 |
| AT3G10490.4 |
1613
|
Chr3: 3268566-3270931 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G10490:three_prime_UTR:3 |
594
|
Chr3: 3270609-3271202 | Arabidopsis thaliana |
| AT3G10490:three_prime_UTR:1 |
957
|
Chr3: 3269927-3270883 | Arabidopsis thaliana |
| AT3G10490:three_prime_UTR:2 |
323
|
Chr3: 3270609-3270931 | Arabidopsis thaliana |
