Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RGP3
AT3G08900.1
1585 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08900:CDS:4 | 339 | Chr3: 2708347-2708685 | Arabidopsis thaliana |
AT3G08900:CDS:3 | 169 | Chr3: 2708759-2708927 | Arabidopsis thaliana |
AT3G08900:CDS:2 | 251 | Chr3: 2709032-2709282 | Arabidopsis thaliana |
AT3G08900:CDS:1 | 330 | Chr3: 2709385-2709714 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08890:exon:5 | 375 | Chr3: 2708373-2708747 | Arabidopsis thaliana |
AT3G08900:exon:4 | 600 | Chr3: 2708086-2708685 | Arabidopsis thaliana |
AT3G08900:exon:3 | 169 | Chr3: 2708759-2708927 | Arabidopsis thaliana |
AT3G08900:exon:2 | 251 | Chr3: 2709032-2709282 | Arabidopsis thaliana |
AT3G08900:exon:1 | 565 | Chr3: 2709385-2709949 | Arabidopsis thaliana |
AT3G02085:exon:1 | 374 | Chr3: 2709438-2709811 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08900:five_prime_UTR:1 | 235 | Chr3: 2709715-2709949 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G08890 | locus:2097668 | AT3G08890 | 2214 | Chr3: 2706534-2708747 | A. thaliana | hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) | NULL | Protein of unknown function, DUF538 | ||
AT3G08900 | locus:2097653 | RGP3 | reversibly glycosylated polypeptide 3 | 1864 | Chr3: 2708086-2709949 | A. thaliana | reversibly glycosylated polypeptide 3;(source:Araport11) | RGP3 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It is a reversibly autoglycosylated protein. Fluorescently-tagged RGP3 is found in the cytosol and associated with Golgi-like particles when expressed in tobacco leaves. An RGP3-YFP fusion protein under the control a native promoter can be found in the endosperm of Arabidopsis embryos during the linear and bent cotyledon stages of development. | reversibly glycosylated polypeptide 3 | RGP, RGP3 |
AT3G02085 | AT3G02085 | 374 | Chr3: 2709438-2709811 | A. thaliana | Natural antisense transcript overlaps with AT3G08900;(source:Araport11) | NULL |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G08890:three_prime_UTR:3 | 375 | Chr3: 2708373-2708747 | Arabidopsis thaliana |
AT3G08900:three_prime_UTR:1 | 261 | Chr3: 2708086-2708346 | Arabidopsis thaliana |