Genomics
Genome feature
| Region: |
five_prime_UTR
|
Length: |
454
 |
| Location: | Chr2:19232607-19233060 | ||
Gene models -
Gene models
No results
Overlapping Features
Genome features that overlap coordinates of this FivePrimeUTR
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2G46790:CDS:1 |
187
|
Chr2: 19232874-19233060 | Arabidopsis thaliana |
| AT2G46790:CDS:1.1 |
187
|
Chr2: 19232874-19233060 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2G46790:exon:1 |
454
|
Chr2: 19232607-19233060 | Arabidopsis thaliana |
| AT2G46790:exon:2 |
418
|
Chr2: 19232643-19233060 | Arabidopsis thaliana |
| AT2G46790:exon:3 |
412
|
Chr2: 19232649-19233060 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2G46790:five_prime_UTR:1 |
267
|
Chr2: 19232607-19232873 | Arabidopsis thaliana |
| AT2G46790:five_prime_UTR:3 |
418
|
Chr2: 19232643-19233060 | Arabidopsis thaliana |
| AT2G46790:five_prime_UTR:4 |
412
|
Chr2: 19232649-19233060 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT2G46790 | locus:2044376 | PRR9 | pseudo-response regulator 9 |
2573
|
Chr2: 19232607-19235179 | A. thaliana | pseudo-response regulator 9;(source:Araport11) | Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY. Acts additively with EC, PRR5 and PRR7 to regulate hypocotyl growth under photoperiodic conditions. | pseudo-response regulator 9 | APRR9, PRR9, TL1 |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT2G46790.3 |
2045
|
Chr2: 19232607-19235179 |
| AT2G46790.4 |
2039
|
Chr2: 19232607-19235179 |
| AT2G46790.1 |
1952
|
Chr2: 19232607-19235179 |
| AT2G46790.2 |
1862
|
Chr2: 19232643-19235117 |
| AT2G46790.5 |
1938
|
Chr2: 19232649-19235112 |
