External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46200:CDS:10 | 94 | Chr2: 18974864-18974957 | Arabidopsis thaliana |
AT2G46200:CDS:8 | 41 | Chr2: 18975032-18975072 | Arabidopsis thaliana |
AT2G46200:CDS:6 | 314 | Chr2: 18975150-18975463 | Arabidopsis thaliana |
AT2G46200:CDS:5 | 73 | Chr2: 18975547-18975619 | Arabidopsis thaliana |
AT2G46200:CDS:4 | 66 | Chr2: 18975720-18975785 | Arabidopsis thaliana |
AT2G46200:CDS:3 | 84 | Chr2: 18975858-18975941 | Arabidopsis thaliana |
AT2G46200:CDS:2 | 322 | Chr2: 18976028-18976349 | Arabidopsis thaliana |
AT2G46200:CDS:1 | 155 | Chr2: 18976492-18976646 | Arabidopsis thaliana |
AT2G46200:CDS:7 | 329 | Chr2: 18975135-18975463 | Arabidopsis thaliana |
AT2G46200:CDS:5.1 | 73 | Chr2: 18975547-18975619 | Arabidopsis thaliana |
AT2G46200:CDS:4.1 | 66 | Chr2: 18975720-18975785 | Arabidopsis thaliana |
AT2G46200:CDS:3.1 | 84 | Chr2: 18975858-18975941 | Arabidopsis thaliana |
AT2G46200:CDS:2.1 | 322 | Chr2: 18976028-18976349 | Arabidopsis thaliana |
AT2G46200:CDS:1.1 | 155 | Chr2: 18976492-18976646 | Arabidopsis thaliana |
AT2G46200:CDS:10.1 | 94 | Chr2: 18974864-18974957 | Arabidopsis thaliana |
AT2G46200:CDS:8.1 | 41 | Chr2: 18975032-18975072 | Arabidopsis thaliana |
AT2G46200:CDS:6.1 | 314 | Chr2: 18975150-18975463 | Arabidopsis thaliana |
AT2G46200:CDS:5.2 | 73 | Chr2: 18975547-18975619 | Arabidopsis thaliana |
AT2G46200:CDS:4.2 | 66 | Chr2: 18975720-18975785 | Arabidopsis thaliana |
AT2G46200:CDS:3.2 | 84 | Chr2: 18975858-18975941 | Arabidopsis thaliana |
AT2G46200:CDS:2.2 | 322 | Chr2: 18976028-18976349 | Arabidopsis thaliana |
AT2G46200:CDS:1.2 | 155 | Chr2: 18976492-18976646 | Arabidopsis thaliana |
AT2G46200:CDS:9 | 45 | Chr2: 18975028-18975072 | Arabidopsis thaliana |
AT2G46200:CDS:6.2 | 314 | Chr2: 18975150-18975463 | Arabidopsis thaliana |
AT2G46200:CDS:5.3 | 73 | Chr2: 18975547-18975619 | Arabidopsis thaliana |
AT2G46200:CDS:4.3 | 66 | Chr2: 18975720-18975785 | Arabidopsis thaliana |
AT2G46200:CDS:3.3 | 84 | Chr2: 18975858-18975941 | Arabidopsis thaliana |
AT2G46200:CDS:2.3 | 322 | Chr2: 18976028-18976349 | Arabidopsis thaliana |
AT2G46200:CDS:1.3 | 155 | Chr2: 18976492-18976646 | Arabidopsis thaliana |
AT2G46210:CDS:1 | 1350 | Chr2: 18977542-18978891 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46200:exon:14 | 591 | Chr2: 18974367-18974957 | Arabidopsis thaliana |
AT2G46200:exon:10 | 432 | Chr2: 18975032-18975463 | Arabidopsis thaliana |
AT2G46200:exon:1 | 2244 | Chr2: 18976818-18979061 | Arabidopsis thaliana |
AT2G46200:exon:13 | 475 | Chr2: 18974483-18974957 | Arabidopsis thaliana |
AT2G46200:exon:11 | 41 | Chr2: 18975032-18975072 | Arabidopsis thaliana |
AT2G46200:exon:3 | 359 | Chr2: 18976492-18976850 | Arabidopsis thaliana |
AT2G46200:exon:12 | 451 | Chr2: 18974622-18975072 | Arabidopsis thaliana |
AT2G46200:exon:9 | 314 | Chr2: 18975150-18975463 | Arabidopsis thaliana |
AT2G46200:exon:8 | 73 | Chr2: 18975547-18975619 | Arabidopsis thaliana |
AT2G46200:exon:7 | 66 | Chr2: 18975720-18975785 | Arabidopsis thaliana |
AT2G46200:exon:6 | 84 | Chr2: 18975858-18975941 | Arabidopsis thaliana |
AT2G46200:exon:5 | 322 | Chr2: 18976028-18976349 | Arabidopsis thaliana |
AT2G46200:exon:4 | 210 | Chr2: 18976492-18976701 | Arabidopsis thaliana |
AT2G46200:exon:2 | 121 | Chr2: 18976818-18976938 | Arabidopsis thaliana |
AT2G46210:exon:1 | 1966 | Chr2: 18977344-18979309 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46200:five_prime_UTR:1 | 2244 | Chr2: 18976818-18979061 | Arabidopsis thaliana |
AT2G46200:five_prime_UTR:3 | 204 | Chr2: 18976647-18976850 | Arabidopsis thaliana |
AT2G46200:five_prime_UTR:4 | 55 | Chr2: 18976647-18976701 | Arabidopsis thaliana |
AT2G46200:five_prime_UTR:2 | 121 | Chr2: 18976818-18976938 | Arabidopsis thaliana |
AT2G46210:five_prime_UTR:1 | 198 | Chr2: 18977344-18977541 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G46210 | locus:2062928 | SLD2 | sphingoid LCB desaturase 2 | 1966 | Chr2: 18977344-18979309 | A. thaliana | Fatty acid/sphingolipid desaturase;(source:Araport11) | NULL | Fatty acid/sphingolipid desaturase | AtSLD2, SLD2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G46200.1 | 3945 | Chr2: 18974367-18979061 |
AT2G46200.3 | 4022 | Chr2: 18974367-18979061 |
AT2G46200.2 | 1734 | Chr2: 18974483-18976850 |
AT2G46200.4 | 1641 | Chr2: 18974622-18976938 |
AT2G46210.1 | 1966 | Chr2: 18977344-18979309 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46200:three_prime_UTR:5 | 497 | Chr2: 18974367-18974863 | Arabidopsis thaliana |
AT2G46200:three_prime_UTR:4 | 591 | Chr2: 18974367-18974957 | Arabidopsis thaliana |
AT2G46200:three_prime_UTR:1 | 103 | Chr2: 18975032-18975134 | Arabidopsis thaliana |
AT2G46200:three_prime_UTR:3 | 381 | Chr2: 18974483-18974863 | Arabidopsis thaliana |
AT2G46200:three_prime_UTR:2 | 406 | Chr2: 18974622-18975027 | Arabidopsis thaliana |
AT2G46210:three_prime_UTR:1 | 418 | Chr2: 18978892-18979309 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
spliceosomal complex | ECO |
molecular function | |
No terms in this category. | |
biological process | |
RNA splicing | ECO |
mRNA processing | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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