Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
Antisense lncRNA: 1, CDSs: 12, Exons: 11, Five Prime UTRs: 4, Genes: 3, mRNAs: 3, Three Prime UTRs: 3
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G43640:CDS:5 | 159 | Chr2: 18097614-18097772 | Arabidopsis thaliana |
AT2G43640:CDS:4 | 110 | Chr2: 18098109-18098218 | Arabidopsis thaliana |
AT2G43640:CDS:2 | 67 | Chr2: 18098342-18098408 | Arabidopsis thaliana |
AT2G43640:CDS:1 | 3 | Chr2: 18098617-18098619 | Arabidopsis thaliana |
AT2G43640:CDS:5.1 | 159 | Chr2: 18097614-18097772 | Arabidopsis thaliana |
AT2G43640:CDS:4.1 | 110 | Chr2: 18098109-18098218 | Arabidopsis thaliana |
AT2G43640:CDS:3 | 94 | Chr2: 18098315-18098408 | Arabidopsis thaliana |
AT2G43640:CDS:1.1 | 3 | Chr2: 18098617-18098619 | Arabidopsis thaliana |
AT2G43640:CDS:5.2 | 159 | Chr2: 18097614-18097772 | Arabidopsis thaliana |
AT2G43640:CDS:4.2 | 110 | Chr2: 18098109-18098218 | Arabidopsis thaliana |
AT2G43640:CDS:3.1 | 94 | Chr2: 18098315-18098408 | Arabidopsis thaliana |
AT2G43640:CDS:1.2 | 3 | Chr2: 18098617-18098619 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G43630:exon:4 | 441 | Chr2: 18097048-18097488 | Arabidopsis thaliana |
AT2G43640:exon:9 | 373 | Chr2: 18097400-18097772 | Arabidopsis thaliana |
AT2G43640:exon:5 | 67 | Chr2: 18098342-18098408 | Arabidopsis thaliana |
AT2G43640:exon:2 | 109 | Chr2: 18099028-18099136 | Arabidopsis thaliana |
AT2G43640:exon:1 | 38 | Chr2: 18099074-18099111 | Arabidopsis thaliana |
AT2G43640:exon:8 | 367 | Chr2: 18097406-18097772 | Arabidopsis thaliana |
AT2G43640:exon:7 | 110 | Chr2: 18098109-18098218 | Arabidopsis thaliana |
AT2G43640:exon:6 | 94 | Chr2: 18098315-18098408 | Arabidopsis thaliana |
AT2G43640:exon:4 | 72 | Chr2: 18098617-18098688 | Arabidopsis thaliana |
AT2G43640:exon:3 | 103 | Chr2: 18099028-18099130 | Arabidopsis thaliana |
AT2G09495:exon:1 | 339 | Chr2: 18098686-18099024 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G43640:five_prime_UTR:2 | 109 | Chr2: 18099028-18099136 | Arabidopsis thaliana |
AT2G43640:five_prime_UTR:1 | 38 | Chr2: 18099074-18099111 | Arabidopsis thaliana |
AT2G43640:five_prime_UTR:4 | 69 | Chr2: 18098620-18098688 | Arabidopsis thaliana |
AT2G43640:five_prime_UTR:3 | 103 | Chr2: 18099028-18099130 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G43630 | locus:2044039 | AT2G43630 | 1804 | Chr2: 18095685-18097488 | A. thaliana | nucleusenvelope protein;(source:Araport11) | NULL | NULL | ||
AT2G43640 | locus:2044029 | AT2G43640 | 1737 | Chr2: 18097400-18099136 | A. thaliana | Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11) | NULL | Signal recognition particle, SRP9/SRP14 subunit | ||
AT2G09495 | AT2G09495 | 339 | Chr2: 18098686-18099024 | A. thaliana | Natural antisense transcript overlaps with AT2G43640;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G43630.1 | 1218 | Chr2: 18095685-18097488 |
AT2G43640.3 | 731 | Chr2: 18097400-18099136 |
AT2G43640.1 | 746 | Chr2: 18097406-18099130 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G43630:three_prime_UTR:1 | 144 | Chr2: 18097345-18097488 | Arabidopsis thaliana |
AT2G43640:three_prime_UTR:2 | 214 | Chr2: 18097400-18097613 | Arabidopsis thaliana |
AT2G43640:three_prime_UTR:1 | 208 | Chr2: 18097406-18097613 | Arabidopsis thaliana |