Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41050:CDS:15 | 84 | Chr2: 17123388-17123471 | Arabidopsis thaliana |
AT2G41050:CDS:13 | 91 | Chr2: 17123559-17123649 | Arabidopsis thaliana |
AT2G41050:CDS:12 | 59 | Chr2: 17123738-17123796 | Arabidopsis thaliana |
AT2G41050:CDS:11 | 21 | Chr2: 17123890-17123910 | Arabidopsis thaliana |
AT2G41050:CDS:10 | 120 | Chr2: 17124014-17124133 | Arabidopsis thaliana |
AT2G41050:CDS:9 | 123 | Chr2: 17124296-17124418 | Arabidopsis thaliana |
AT2G41050:CDS:8 | 151 | Chr2: 17124504-17124654 | Arabidopsis thaliana |
AT2G41050:CDS:7 | 161 | Chr2: 17124776-17124936 | Arabidopsis thaliana |
AT2G41050:CDS:6 | 3 | Chr2: 17125030-17125032 | Arabidopsis thaliana |
AT2G41050:CDS:15.1 | 84 | Chr2: 17123388-17123471 | Arabidopsis thaliana |
AT2G41050:CDS:13.1 | 91 | Chr2: 17123559-17123649 | Arabidopsis thaliana |
AT2G41050:CDS:12.1 | 59 | Chr2: 17123738-17123796 | Arabidopsis thaliana |
AT2G41050:CDS:11.1 | 21 | Chr2: 17123890-17123910 | Arabidopsis thaliana |
AT2G41050:CDS:10.1 | 120 | Chr2: 17124014-17124133 | Arabidopsis thaliana |
AT2G41050:CDS:9.1 | 123 | Chr2: 17124296-17124418 | Arabidopsis thaliana |
AT2G41050:CDS:8.1 | 151 | Chr2: 17124504-17124654 | Arabidopsis thaliana |
AT2G41050:CDS:7.1 | 161 | Chr2: 17124776-17124936 | Arabidopsis thaliana |
AT2G41050:CDS:5 | 90 | Chr2: 17125030-17125119 | Arabidopsis thaliana |
AT2G41050:CDS:4 | 27 | Chr2: 17125186-17125212 | Arabidopsis thaliana |
AT2G41050:CDS:2 | 43 | Chr2: 17125305-17125347 | Arabidopsis thaliana |
AT2G41050:CDS:1 | 161 | Chr2: 17125462-17125622 | Arabidopsis thaliana |
AT2G41050:CDS:15.2 | 84 | Chr2: 17123388-17123471 | Arabidopsis thaliana |
AT2G41050:CDS:13.2 | 91 | Chr2: 17123559-17123649 | Arabidopsis thaliana |
AT2G41050:CDS:12.2 | 59 | Chr2: 17123738-17123796 | Arabidopsis thaliana |
AT2G41050:CDS:11.2 | 21 | Chr2: 17123890-17123910 | Arabidopsis thaliana |
AT2G41050:CDS:10.2 | 120 | Chr2: 17124014-17124133 | Arabidopsis thaliana |
AT2G41050:CDS:9.2 | 123 | Chr2: 17124296-17124418 | Arabidopsis thaliana |
AT2G41050:CDS:8.2 | 151 | Chr2: 17124504-17124654 | Arabidopsis thaliana |
AT2G41050:CDS:7.2 | 161 | Chr2: 17124776-17124936 | Arabidopsis thaliana |
AT2G41050:CDS:5.1 | 90 | Chr2: 17125030-17125119 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41040:exon:7 | 287 | Chr2: 17122936-17123222 | Arabidopsis thaliana |
AT2G41050:exon:18 | 290 | Chr2: 17123182-17123471 | Arabidopsis thaliana |
AT2G41050:exon:7 | 128 | Chr2: 17125030-17125157 | Arabidopsis thaliana |
AT2G41050:exon:2 | 664 | Chr2: 17125462-17126125 | Arabidopsis thaliana |
AT2G41050:exon:4 | 337 | Chr2: 17125305-17125641 | Arabidopsis thaliana |
AT2G41050:exon:16 | 460 | Chr2: 17123190-17123649 | Arabidopsis thaliana |
AT2G41050:exon:17 | 282 | Chr2: 17123190-17123471 | Arabidopsis thaliana |
AT2G41050:exon:15 | 91 | Chr2: 17123559-17123649 | Arabidopsis thaliana |
AT2G41050:exon:14 | 59 | Chr2: 17123738-17123796 | Arabidopsis thaliana |
AT2G41050:exon:13 | 21 | Chr2: 17123890-17123910 | Arabidopsis thaliana |
AT2G41050:exon:12 | 120 | Chr2: 17124014-17124133 | Arabidopsis thaliana |
AT2G41050:exon:11 | 123 | Chr2: 17124296-17124418 | Arabidopsis thaliana |
AT2G41050:exon:10 | 151 | Chr2: 17124504-17124654 | Arabidopsis thaliana |
AT2G41050:exon:9 | 161 | Chr2: 17124776-17124936 | Arabidopsis thaliana |
AT2G41050:exon:8 | 90 | Chr2: 17125030-17125119 | Arabidopsis thaliana |
AT2G41050:exon:6 | 27 | Chr2: 17125186-17125212 | Arabidopsis thaliana |
AT2G41050:exon:5 | 43 | Chr2: 17125305-17125347 | Arabidopsis thaliana |
AT2G41050:exon:3 | 180 | Chr2: 17125462-17125641 | Arabidopsis thaliana |
AT2G41050:exon:1 | 332 | Chr2: 17126153-17126484 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41050:five_prime_UTR:5 | 125 | Chr2: 17125033-17125157 | Arabidopsis thaliana |
AT2G41050:five_prime_UTR:2 | 503 | Chr2: 17125623-17126125 | Arabidopsis thaliana |
AT2G41050:five_prime_UTR:4 | 322 | Chr2: 17125320-17125641 | Arabidopsis thaliana |
AT2G41050:five_prime_UTR:3 | 19 | Chr2: 17125623-17125641 | Arabidopsis thaliana |
AT2G41050:five_prime_UTR:1 | 332 | Chr2: 17126153-17126484 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G41040 | locus:2063218 | AT2G41040 | 1896 | Chr2: 17121327-17123222 | A. thaliana | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) | Methyltransferase, located in chloroplast, involved in response to karrikin. | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||
AT2G41050 | locus:2063208 | AT2G41050 | 3303 | Chr2: 17123182-17126484 | A. thaliana | PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) | NULL | PQ-loop repeat family protein / transmembrane family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G41040.1 | 1389 | Chr2: 17121327-17123222 |
AT2G41050.2 | 1144 | Chr2: 17123182-17125157 |
AT2G41050.3 | 1832 | Chr2: 17123190-17126125 |
AT2G41050.4 | 1794 | Chr2: 17123190-17126484 |
AT2G41050.5 | 1767 | Chr2: 17123190-17126484 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G41040:three_prime_UTR:1 | 158 | Chr2: 17123065-17123222 | Arabidopsis thaliana |
AT2G41050:three_prime_UTR:3 | 206 | Chr2: 17123182-17123387 | Arabidopsis thaliana |
AT2G41050:three_prime_UTR:1 | 339 | Chr2: 17123190-17123528 | Arabidopsis thaliana |
AT2G41050:three_prime_UTR:2 | 198 | Chr2: 17123190-17123387 | Arabidopsis thaliana |