Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
RHC1A
AT2G40830.2
1662 |
|
|
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RHC1A
AT2G40830.4
2196 |
|
|
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RHC1A
AT2G40830.3
1565 |
|
|
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RHC1A
AT2G40830.1
1553 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40830:CDS:1 | 987 | Chr2: 17043642-17044628 | Arabidopsis thaliana |
AT2G40830:CDS:1.1 | 987 | Chr2: 17043642-17044628 | Arabidopsis thaliana |
AT2G40830:CDS:1.2 | 987 | Chr2: 17043642-17044628 | Arabidopsis thaliana |
AT2G40830:CDS:1.3 | 987 | Chr2: 17043642-17044628 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40830:exon:2 | 270 | Chr2: 17042623-17042892 | Arabidopsis thaliana |
AT2G40830:exon:4 | 2035 | Chr2: 17042881-17044915 | Arabidopsis thaliana |
AT2G40830:exon:3 | 12 | Chr2: 17042881-17042892 | Arabidopsis thaliana |
AT2G40830:exon:1 | 161 | Chr2: 17042623-17042783 | Arabidopsis thaliana |
AT2G40830:exon:5 | 1392 | Chr2: 17043524-17044915 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40830:five_prime_UTR:2 | 270 | Chr2: 17042623-17042892 | Arabidopsis thaliana |
AT2G40830:five_prime_UTR:4 | 761 | Chr2: 17042881-17043641 | Arabidopsis thaliana |
AT2G40830:five_prime_UTR:3 | 12 | Chr2: 17042881-17042892 | Arabidopsis thaliana |
AT2G40830:five_prime_UTR:1 | 161 | Chr2: 17042623-17042783 | Arabidopsis thaliana |
AT2G40830:five_prime_UTR:5 | 118 | Chr2: 17043524-17043641 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G40830 | locus:2058465 | RHC1A | RING-H2 finger C1A | 2293 | Chr2: 17042623-17044915 | A. thaliana | RING-H2 finger C1A;(source:Araport11) | Encodes an E3 ubiquitin ligase for the GA-receptor GID1 that functions as a negative regulator of GA signaling in seedlings and seeds by inducing ubiquitin-dependent proteolysis of GID1s. Tyr321 phosphorylation of GARU by TAGK2 inactivates GARU. | RING-H2 finger C1A | AIRP5, BTL01, GARU, RHC1A |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G40830.2 | 1662 | Chr2: 17042623-17044915 |
AT2G40830.4 | 2196 | Chr2: 17042623-17044915 |
AT2G40830.1 | 1553 | Chr2: 17042623-17044915 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G40830:three_prime_UTR:1 | 287 | Chr2: 17044629-17044915 | Arabidopsis thaliana |