Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38600:CDS:1 | 365 | Chr2: 16145907-16146271 | Arabidopsis thaliana |
AT2G38600:CDS:2 | 213 | Chr2: 16146378-16146590 | Arabidopsis thaliana |
AT2G38600:CDS:3 | 178 | Chr2: 16146680-16146857 | Arabidopsis thaliana |
AT2G38600:CDS:1.1 | 365 | Chr2: 16145907-16146271 | Arabidopsis thaliana |
AT2G38600:CDS:2.1 | 213 | Chr2: 16146378-16146590 | Arabidopsis thaliana |
AT2G38600:CDS:3.1 | 178 | Chr2: 16146680-16146857 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G08970:exon:1 | 248 | Chr2: 16145437-16145684 | Arabidopsis thaliana |
AT2G38600:exon:2 | 642 | Chr2: 16145630-16146271 | Arabidopsis thaliana |
AT2G38600:exon:1 | 23 | Chr2: 16145630-16145652 | Arabidopsis thaliana |
AT2G38600:exon:3 | 383 | Chr2: 16145889-16146271 | Arabidopsis thaliana |
AT2G38600:exon:4 | 213 | Chr2: 16146378-16146590 | Arabidopsis thaliana |
AT2G38600:exon:5 | 465 | Chr2: 16146680-16147144 | Arabidopsis thaliana |
AT2G38610:exon:10 | 599 | Chr2: 16147106-16147704 | Arabidopsis thaliana |
AT2G38610:exon:9 | 592 | Chr2: 16147113-16147704 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38600:five_prime_UTR:2 | 277 | Chr2: 16145630-16145906 | Arabidopsis thaliana |
AT2G38600:five_prime_UTR:1 | 23 | Chr2: 16145630-16145652 | Arabidopsis thaliana |
AT2G38600:five_prime_UTR:3 | 18 | Chr2: 16145889-16145906 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G08970 | AT2G08970 | 248 | Chr2: 16145437-16145684 | A. thaliana | None;(source:Araport11) | NULL | ||||
AT2G38600 | locus:2064128 | AT2G38600 | 1515 | Chr2: 16145630-16147144 | A. thaliana | HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) | NULL | HAD superfamily, subfamily IIIB acid phosphatase | ||
AT2G38610 | locus:2064097 | AT2G38610 | 2829 | Chr2: 16147106-16149934 | A. thaliana | RNA-binding KH domain-containing protein;(source:Araport11) | Member of the K-homologous (KH) family, members have a type of nucleic acid-binding protein containing the KH domain and has been found to affect splicing and transcriptional regulation. | RNA-binding KH domain-containing protein | KH9 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G38600.2 | 1320 | Chr2: 16145630-16147144 |
AT2G38610.2 | 1603 | Chr2: 16147106-16149934 |
AT2G38610.1 | 1452 | Chr2: 16147113-16149873 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G38600:three_prime_UTR:1 | 287 | Chr2: 16146858-16147144 | Arabidopsis thaliana |
AT2G38610:three_prime_UTR:2 | 446 | Chr2: 16147106-16147551 | Arabidopsis thaliana |
AT2G38610:three_prime_UTR:1 | 439 | Chr2: 16147113-16147551 | Arabidopsis thaliana |