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Gene : APD4 A. thaliana

DB identifier  ? AT2G38195 Secondary Identifier  ? locus:4515102961
Name  ? ABERRANT POLLEN DEVELOPMENT 4 Brief Description  RING/U-box superfamily protein
TAIR Computational Description  RING/U-box superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  RING/U-box superfamily protein
TAIR Aliases  APD4

0 Gene Rifs

1 Organism

4 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4392  
Location: Chr2:16002263-16006654

Gene models - APD4 AT2G38195

? Gene models

Transcripts: 2  Exons: 21  Introns: 19 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
APD4_ARATH APD4_ARATH-3 APD4_ARATH-2 developmental stage In young seedlings, expressed in the shoot apical meristem (SAM) and in root tips (PubMed:22897245). In inflorescence, detected in young floral buds, carpels and seeds (PubMed:22897245).
APD4_ARATH APD4_ARATH-3 APD4_ARATH-2 function Involved in pollen mitosis II (PMII) regulation during male gametogenesis.
APD4_ARATH APD4_ARATH-3 APD4_ARATH-2 pathway Protein modification; protein ubiquitination.
APD4_ARATH APD4_ARATH-3 APD4_ARATH-2 tissue specificity Expressed in the shoot apical meristems (SAM), root tips and inflorescences.

3 Proteins

Function

Gene Ontology

cellular component
plant-type vacuole membrane  ? ECO  
endosome  ? ECO  
molecular function
transferase activity  ? ECO  
metal ion binding  ? ECO  
biological process
pollen development  ? ECO  
protein ubiquitination  ? ECO  
mitotic cell cycle  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets