Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30890:CDS:4 | 328 | Chr2: 13149336-13149663 | Arabidopsis thaliana |
AT2G30900:CDS:1 | 290 | Chr2: 13150481-13150770 | Arabidopsis thaliana |
AT2G30900:CDS:2 | 178 | Chr2: 13151259-13151436 | Arabidopsis thaliana |
AT2G30900:CDS:3 | 176 | Chr2: 13151527-13151702 | Arabidopsis thaliana |
AT2G30900:CDS:5 | 159 | Chr2: 13151791-13151949 | Arabidopsis thaliana |
AT2G30900:CDS:7 | 304 | Chr2: 13152114-13152417 | Arabidopsis thaliana |
AT2G30900:CDS:1.1 | 290 | Chr2: 13150481-13150770 | Arabidopsis thaliana |
AT2G30900:CDS:2.1 | 178 | Chr2: 13151259-13151436 | Arabidopsis thaliana |
AT2G30900:CDS:3.1 | 176 | Chr2: 13151527-13151702 | Arabidopsis thaliana |
AT2G30900:CDS:4 | 137 | Chr2: 13151791-13151927 | Arabidopsis thaliana |
AT2G30900:CDS:6 | 44 | Chr2: 13152114-13152157 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30890:exon:4 | 484 | Chr2: 13149336-13149819 | Arabidopsis thaliana |
AT2G30900:exon:6 | 159 | Chr2: 13151791-13151949 | Arabidopsis thaliana |
AT2G30900:exon:1 | 330 | Chr2: 13149414-13149743 | Arabidopsis thaliana |
AT2G30900:exon:2 | 435 | Chr2: 13150336-13150770 | Arabidopsis thaliana |
AT2G30900:exon:3 | 178 | Chr2: 13151259-13151436 | Arabidopsis thaliana |
AT2G30900:exon:4 | 176 | Chr2: 13151527-13151702 | Arabidopsis thaliana |
AT2G30900:exon:5 | 137 | Chr2: 13151791-13151927 | Arabidopsis thaliana |
AT2G30900:exon:7 | 429 | Chr2: 13152114-13152542 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30900:five_prime_UTR:1 | 330 | Chr2: 13149414-13149743 | Arabidopsis thaliana |
AT2G30900:five_prime_UTR:2 | 145 | Chr2: 13150336-13150480 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G30890 | locus:2052846 | AT2G30890 | 2199 | Chr2: 13147621-13149819 | A. thaliana | Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) | NULL | Cytochrome b561/ferric reductase transmembrane protein family | ||
AT2G30900 | locus:2052856 | TBL43 | TRICHOME BIREFRINGENCE-LIKE 43 | 3129 | Chr2: 13149414-13152542 | A. thaliana | TRICHOME BIREFRINGENCE-LIKE 43;(source:Araport11) | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 43 | TBL43 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G30890.1 | 1083 | Chr2: 13147621-13149819 |
AT2G30900.2 | 1685 | Chr2: 13149414-13152542 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30890:three_prime_UTR:1 | 156 | Chr2: 13149664-13149819 | Arabidopsis thaliana |
AT2G30900:three_prime_UTR:2 | 125 | Chr2: 13152418-13152542 | Arabidopsis thaliana |
AT2G30900:three_prime_UTR:1 | 385 | Chr2: 13152158-13152542 | Arabidopsis thaliana |