Genomics
Transcript | Exons | Introns | ||||||||||||||
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RPT2
AT2G30520.3
2181 |
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RPT2
AT2G30520.1
2148 |
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RPT2
AT2G30520.2
2180 |
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Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30520:CDS:5 | 1263 | Chr2: 13002920-13004182 | Arabidopsis thaliana |
AT2G30520:CDS:4 | 375 | Chr2: 13004779-13005153 | Arabidopsis thaliana |
AT2G30520:CDS:5.1 | 1263 | Chr2: 13002920-13004182 | Arabidopsis thaliana |
AT2G30520:CDS:3 | 378 | Chr2: 13004779-13005156 | Arabidopsis thaliana |
AT2G30520:CDS:2 | 70 | Chr2: 13005350-13005419 | Arabidopsis thaliana |
AT2G30520:CDS:1 | 71 | Chr2: 13005503-13005573 | Arabidopsis thaliana |
AT2G30520:CDS:5.2 | 1263 | Chr2: 13002920-13004182 | Arabidopsis thaliana |
AT2G30520:CDS:4.1 | 375 | Chr2: 13004779-13005153 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30520:exon:9 | 1497 | Chr2: 13002686-13004182 | Arabidopsis thaliana |
AT2G30520:exon:3 | 306 | Chr2: 13005350-13005655 | Arabidopsis thaliana |
AT2G30520:exon:8 | 1456 | Chr2: 13002727-13004182 | Arabidopsis thaliana |
AT2G30520:exon:6 | 378 | Chr2: 13004779-13005156 | Arabidopsis thaliana |
AT2G30520:exon:4 | 70 | Chr2: 13005350-13005419 | Arabidopsis thaliana |
AT2G30520:exon:1 | 244 | Chr2: 13005503-13005746 | Arabidopsis thaliana |
AT2G30520:exon:7 | 1441 | Chr2: 13002742-13004182 | Arabidopsis thaliana |
AT2G30520:exon:5 | 641 | Chr2: 13004779-13005419 | Arabidopsis thaliana |
AT2G30520:exon:2 | 98 | Chr2: 13005503-13005600 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30520:five_prime_UTR:5 | 3 | Chr2: 13005154-13005156 | Arabidopsis thaliana |
AT2G30520:five_prime_UTR:3 | 306 | Chr2: 13005350-13005655 | Arabidopsis thaliana |
AT2G30520:five_prime_UTR:1 | 173 | Chr2: 13005574-13005746 | Arabidopsis thaliana |
AT2G30520:five_prime_UTR:4 | 266 | Chr2: 13005154-13005419 | Arabidopsis thaliana |
AT2G30520:five_prime_UTR:2 | 98 | Chr2: 13005503-13005600 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G30520 | locus:2064357 | RPT2 | ROOT PHOTOTROPISM 2 | 3061 | Chr2: 13002686-13005746 | A. thaliana | Phototropic-responsive NPH3 family protein;(source:Araport11) | Encodes a phototropin-interacting NRL protein that is an early signaling component in the phototrophic response and is essential for the phototropin-mediated chloroplast accumulation response but is not involved in the chloroplast avoidance response or stomatal opening. | Phototropic-responsive NPH3 family protein | RPT2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G30520.3 | 2181 | Chr2: 13002686-13005655 |
AT2G30520.1 | 2148 | Chr2: 13002727-13005746 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G30520:three_prime_UTR:3 | 234 | Chr2: 13002686-13002919 | Arabidopsis thaliana |
AT2G30520:three_prime_UTR:2 | 193 | Chr2: 13002727-13002919 | Arabidopsis thaliana |
AT2G30520:three_prime_UTR:1 | 178 | Chr2: 13002742-13002919 | Arabidopsis thaliana |