Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G13865:exon:1 | 336 | Chr2: 5817230-5817565 | Arabidopsis thaliana |
AT2G13865:exon:2 | 279 | Chr2: 5817723-5818001 | Arabidopsis thaliana |
AT2G13870:exon:1 | 2209 | Chr2: 5819376-5821584 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr2_5818002..5819375 | 1374 | Chr2: 5818002-5819375 | Arabidopsis thaliana |
intergenic_region_chrChr2_5821585..5824323 | 2739 | Chr2: 5821585-5824323 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G13865.1 | 615 | Chr2: 5817230-5818001 |
AT2G13870.1 | 2209 | Chr2: 5819376-5821584 |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G13865 | locus:504956062 | AT2G13865 | 772 | Chr2: 5817230-5818001 | A. thaliana | transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52840.1);(source:TAIR10) | NULL | transposable element gene | ||
AT2G13870 | locus:2043743 | AT2G13870 | 2209 | Chr2: 5819376-5821584 | A. thaliana | transposable_element_gene;(source:Araport11);CACTA-like transposase family (Ptta/En/Spm), has a 1.4e-103 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE23705:transposon_fragment:1 | 4871 | Chr2: 5817335-5822205 | Arabidopsis thaliana |