Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G11220:exon:1 | 1644 | Chr2: 4460460-4462103 | Arabidopsis thaliana |
AT2G11230:exon:1 | 4410 | Chr2: 4463180-4467589 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr2_4462104..4463179 | 1076 | Chr2: 4462104-4463179 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G11220.1 | 1644 | Chr2: 4460460-4462103 |
AT2G11230.1 | 4410 | Chr2: 4463180-4467589 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE18710 | 10270 | Chr2: 4460099-4470368 | Arabidopsis thaliana |
AT2TE18715 | 4164 | Chr2: 4461786-4465949 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G11220 | locus:2055081 | AT2G11220 | 1644 | Chr2: 4460460-4462103 | A. thaliana | transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 3.5e-16 P-value blast match to gb|AAO73521.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10) | NULL | transposable element gene | ||
AT2G11230 | locus:2055091 | AT2G11230 | 4410 | Chr2: 4463180-4467589 | A. thaliana | transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family (Athila), has a 8.9e-61 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana);(source:TAIR10) | NULL | transposable element gene |