Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G05160:CDS:4 | 194 | Chr2: 1859313-1859506 | Arabidopsis thaliana |
AT2G05160:CDS:2 | 425 | Chr2: 1859582-1860006 | Arabidopsis thaliana |
AT2G05160:CDS:1 | 848 | Chr2: 1860084-1860931 | Arabidopsis thaliana |
AT2G05160:CDS:6 | 97 | Chr2: 1859011-1859107 | Arabidopsis thaliana |
AT2G05160:CDS:5 | 103 | Chr2: 1859187-1859289 | Arabidopsis thaliana |
AT2G05160:CDS:3 | 138 | Chr2: 1859369-1859506 | Arabidopsis thaliana |
AT2G05160:CDS:2.1 | 425 | Chr2: 1859582-1860006 | Arabidopsis thaliana |
AT2G05160:CDS:1.1 | 848 | Chr2: 1860084-1860931 | Arabidopsis thaliana |
AT2G05160:CDS:6.1 | 97 | Chr2: 1859011-1859107 | Arabidopsis thaliana |
AT2G05160:CDS:5.1 | 103 | Chr2: 1859187-1859289 | Arabidopsis thaliana |
AT2G05160:CDS:3.1 | 138 | Chr2: 1859369-1859506 | Arabidopsis thaliana |
AT2G05160:CDS:2.2 | 425 | Chr2: 1859582-1860006 | Arabidopsis thaliana |
AT2G05160:CDS:1.2 | 848 | Chr2: 1860084-1860931 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G05160:exon:8 | 320 | Chr2: 1859187-1859506 | Arabidopsis thaliana |
AT2G05160:exon:2 | 213 | Chr2: 1861722-1861934 | Arabidopsis thaliana |
AT2G05160:exon:4 | 152 | Chr2: 1861466-1861617 | Arabidopsis thaliana |
AT2G05160:exon:1 | 343 | Chr2: 1861722-1862064 | Arabidopsis thaliana |
AT2G05160:exon:10 | 565 | Chr2: 1858543-1859107 | Arabidopsis thaliana |
AT2G05160:exon:9 | 103 | Chr2: 1859187-1859289 | Arabidopsis thaliana |
AT2G05160:exon:7 | 138 | Chr2: 1859369-1859506 | Arabidopsis thaliana |
AT2G05160:exon:6 | 425 | Chr2: 1859582-1860006 | Arabidopsis thaliana |
AT2G05160:exon:5 | 879 | Chr2: 1860084-1860962 | Arabidopsis thaliana |
AT2G05160:exon:3 | 599 | Chr2: 1861466-1862064 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G05160:five_prime_UTR:2 | 213 | Chr2: 1861722-1861934 | Arabidopsis thaliana |
AT2G05160:five_prime_UTR:4 | 152 | Chr2: 1861466-1861617 | Arabidopsis thaliana |
AT2G05160:five_prime_UTR:1 | 343 | Chr2: 1861722-1862064 | Arabidopsis thaliana |
AT2G05160:five_prime_UTR:5 | 31 | Chr2: 1860932-1860962 | Arabidopsis thaliana |
AT2G05160:five_prime_UTR:3 | 599 | Chr2: 1861466-1862064 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G05160 | locus:2051239 | AT2G05160 | 3522 | Chr2: 1858543-1862064 | A. thaliana | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11) | Non tandem zinc finger protein containing a CCCH motif and RRM domain. Paralogous with AtChH18-L. Overexpression results in pollen defect but no loss of function phenotype. | CCCH-type zinc fingerfamily protein with RNA-binding domain | AtC3H18 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G05160.1 | 2605 | Chr2: 1858543-1862064 |
AT2G05160.2 | 2709 | Chr2: 1858543-1862064 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G05160:three_prime_UTR:2 | 565 | Chr2: 1858543-1859107 | Arabidopsis thaliana |
AT2G05160:three_prime_UTR:1 | 126 | Chr2: 1859187-1859312 | Arabidopsis thaliana |
AT2G05160:three_prime_UTR:3 | 468 | Chr2: 1858543-1859010 | Arabidopsis thaliana |