Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04270:CDS:1 | 95 | Chr2: 1474961-1475055 | Arabidopsis thaliana |
AT2G04270:CDS:3 | 104 | Chr2: 1475326-1475429 | Arabidopsis thaliana |
AT2G04270:CDS:5 | 182 | Chr2: 1475600-1475781 | Arabidopsis thaliana |
AT2G04270:CDS:7 | 259 | Chr2: 1475950-1476208 | Arabidopsis thaliana |
AT2G04270:CDS:10 | 1061 | Chr2: 1476297-1477357 | Arabidopsis thaliana |
AT2G04270:CDS:12 | 318 | Chr2: 1477440-1477757 | Arabidopsis thaliana |
AT2G04270:CDS:13 | 42 | Chr2: 1477855-1477896 | Arabidopsis thaliana |
AT2G04270:CDS:14 | 125 | Chr2: 1478163-1478287 | Arabidopsis thaliana |
AT2G04270:CDS:15 | 148 | Chr2: 1478380-1478527 | Arabidopsis thaliana |
AT2G04270:CDS:16 | 73 | Chr2: 1478837-1478909 | Arabidopsis thaliana |
AT2G04270:CDS:17 | 113 | Chr2: 1479029-1479141 | Arabidopsis thaliana |
AT2G04270:CDS:18 | 120 | Chr2: 1479257-1479376 | Arabidopsis thaliana |
AT2G04270:CDS:20 | 156 | Chr2: 1479540-1479695 | Arabidopsis thaliana |
AT2G04270:CDS:21 | 195 | Chr2: 1479820-1480014 | Arabidopsis thaliana |
AT2G04270:CDS:6 | 29 | Chr2: 1475753-1475781 | Arabidopsis thaliana |
AT2G04270:CDS:8 | 236 | Chr2: 1475973-1476208 | Arabidopsis thaliana |
AT2G04270:CDS:10.1 | 1061 | Chr2: 1476297-1477357 | Arabidopsis thaliana |
AT2G04270:CDS:12.1 | 318 | Chr2: 1477440-1477757 | Arabidopsis thaliana |
AT2G04270:CDS:13.1 | 42 | Chr2: 1477855-1477896 | Arabidopsis thaliana |
AT2G04270:CDS:14.1 | 125 | Chr2: 1478163-1478287 | Arabidopsis thaliana |
AT2G04270:CDS:15.1 | 148 | Chr2: 1478380-1478527 | Arabidopsis thaliana |
AT2G04270:CDS:16.1 | 73 | Chr2: 1478837-1478909 | Arabidopsis thaliana |
AT2G04270:CDS:17.1 | 113 | Chr2: 1479029-1479141 | Arabidopsis thaliana |
AT2G04270:CDS:18.1 | 120 | Chr2: 1479257-1479376 | Arabidopsis thaliana |
AT2G04270:CDS:20.1 | 156 | Chr2: 1479540-1479695 | Arabidopsis thaliana |
AT2G04270:CDS:21.1 | 195 | Chr2: 1479820-1480014 | Arabidopsis thaliana |
AT2G04270:CDS:11 | 852 | Chr2: 1476506-1477357 | Arabidopsis thaliana |
AT2G04270:CDS:12.2 | 318 | Chr2: 1477440-1477757 | Arabidopsis thaliana |
AT2G04270:CDS:13.2 | 42 | Chr2: 1477855-1477896 | Arabidopsis thaliana |
AT2G04270:CDS:14.2 | 125 | Chr2: 1478163-1478287 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04270:exon:1 | 377 | Chr2: 1474679-1475055 | Arabidopsis thaliana |
AT2G04270:exon:2 | 320 | Chr2: 1474736-1475055 | Arabidopsis thaliana |
AT2G04270:exon:10 | 182 | Chr2: 1475600-1475781 | Arabidopsis thaliana |
AT2G04270:exon:30 | 767 | Chr2: 1479820-1480586 | Arabidopsis thaliana |
AT2G04270:exon:3 | 311 | Chr2: 1474745-1475055 | Arabidopsis thaliana |
AT2G04270:exon:4 | 297 | Chr2: 1474759-1475055 | Arabidopsis thaliana |
AT2G04270:exon:11 | 609 | Chr2: 1475600-1476208 | Arabidopsis thaliana |
AT2G04270:exon:5 | 285 | Chr2: 1474771-1475055 | Arabidopsis thaliana |
AT2G04270:exon:7 | 88 | Chr2: 1475326-1475413 | Arabidopsis thaliana |
AT2G04270:exon:9 | 213 | Chr2: 1475569-1475781 | Arabidopsis thaliana |
AT2G04270:exon:13 | 259 | Chr2: 1475950-1476208 | Arabidopsis thaliana |
AT2G04270:exon:29 | 391 | Chr2: 1479820-1480210 | Arabidopsis thaliana |
AT2G04270:exon:6 | 250 | Chr2: 1474806-1475055 | Arabidopsis thaliana |
AT2G04270:exon:8 | 104 | Chr2: 1475326-1475429 | Arabidopsis thaliana |
AT2G04270:exon:12 | 177 | Chr2: 1475605-1475781 | Arabidopsis thaliana |
AT2G04270:exon:14 | 236 | Chr2: 1475973-1476208 | Arabidopsis thaliana |
AT2G04270:exon:17 | 1061 | Chr2: 1476297-1477357 | Arabidopsis thaliana |
AT2G04270:exon:28 | 290 | Chr2: 1479820-1480109 | Arabidopsis thaliana |
AT2G04270:exon:25 | 307 | Chr2: 1479257-1479563 | Arabidopsis thaliana |
AT2G04270:exon:15 | 99 | Chr2: 1476110-1476208 | Arabidopsis thaliana |
AT2G04270:exon:16 | 1072 | Chr2: 1476286-1477357 | Arabidopsis thaliana |
AT2G04270:exon:18 | 318 | Chr2: 1477440-1477757 | Arabidopsis thaliana |
AT2G04270:exon:19 | 42 | Chr2: 1477855-1477896 | Arabidopsis thaliana |
AT2G04270:exon:20 | 125 | Chr2: 1478163-1478287 | Arabidopsis thaliana |
AT2G04270:exon:21 | 148 | Chr2: 1478380-1478527 | Arabidopsis thaliana |
AT2G04270:exon:22 | 73 | Chr2: 1478837-1478909 | Arabidopsis thaliana |
AT2G04270:exon:23 | 113 | Chr2: 1479029-1479141 | Arabidopsis thaliana |
AT2G04270:exon:24 | 120 | Chr2: 1479257-1479376 | Arabidopsis thaliana |
AT2G04270:exon:26 | 156 | Chr2: 1479540-1479695 | Arabidopsis thaliana |
AT2G04270:exon:27 | 195 | Chr2: 1479820-1480014 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04270:five_prime_UTR:1 | 282 | Chr2: 1474679-1474960 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:8 | 153 | Chr2: 1475600-1475752 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:2 | 320 | Chr2: 1474736-1475055 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:9 | 182 | Chr2: 1475600-1475781 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:13 | 259 | Chr2: 1475950-1476208 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:3 | 311 | Chr2: 1474745-1475055 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:10 | 503 | Chr2: 1475600-1476102 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:4 | 297 | Chr2: 1474759-1475055 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:11 | 609 | Chr2: 1475600-1476208 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:5 | 190 | Chr2: 1474771-1474960 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:6 | 250 | Chr2: 1474806-1475055 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:7 | 104 | Chr2: 1475326-1475429 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:12 | 148 | Chr2: 1475605-1475752 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:14 | 99 | Chr2: 1476110-1476208 | Arabidopsis thaliana |
AT2G04270:five_prime_UTR:15 | 220 | Chr2: 1476286-1476505 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G04270 | locus:2059775 | RNEE/G | RNAse E/G-like | 5908 | Chr2: 1474679-1480586 | A. thaliana | RNAse E/G-like protein;(source:Araport11) | Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose. | RNAse E/G-like | RNE, RNEE/G |
AT2G04280 | locus:2059767 | AT2G04280 | 2022 | Chr2: 1480068-1482089 | A. thaliana | calcium ion-binding protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G04270.6 | 3193 | Chr2: 1474736-1480014 |
AT2G04270.4 | 3799 | Chr2: 1474736-1480586 |
AT2G04270.7 | 3375 | Chr2: 1474745-1480014 |
AT2G04270.8 | 3372 | Chr2: 1474759-1480014 |
AT2G04270.5 | 3392 | Chr2: 1474771-1480210 |
AT2G04270.2 | 3213 | Chr2: 1474806-1480109 |
AT2G04270.3 | 2297 | Chr2: 1476110-1479563 |
AT2G04270.9 | 2461 | Chr2: 1476110-1480014 |
AT2G04280.1 | 2022 | Chr2: 1480068-1482089 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G04270:three_prime_UTR:4 | 572 | Chr2: 1480015-1480586 | Arabidopsis thaliana |
AT2G04270:three_prime_UTR:3 | 196 | Chr2: 1480015-1480210 | Arabidopsis thaliana |
AT2G04270:three_prime_UTR:2 | 95 | Chr2: 1480015-1480109 | Arabidopsis thaliana |
AT2G04270:three_prime_UTR:1 | 118 | Chr2: 1479446-1479563 | Arabidopsis thaliana |
AT2G04280:three_prime_UTR:1 | 209 | Chr2: 1480068-1480276 | Arabidopsis thaliana |