Genomics
Genome feature
| Region: |
mRNA
|
Length: |
2511
 |
| Location: | Chr1:26891956-26894856 reverse strand | ||
| Transcript | Exons | Introns | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
AT1G71360.1
AT1G71360.1
2511 |
|
|
||||||||||
|
AT1G71360.2
AT1G71360.2
2009 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 4, Exons: 5, Five Prime UTRs: 3, Gene: 1, mRNA: 1, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G71360:CDS:3 |
1628
|
Chr1: 26892214-26893841 | Arabidopsis thaliana |
| AT1G71360:CDS:2 |
163
|
Chr1: 26894004-26894166 | Arabidopsis thaliana |
| AT1G71360:CDS:3.1 |
1628
|
Chr1: 26892214-26893841 | Arabidopsis thaliana |
| AT1G71360:CDS:1 |
241
|
Chr1: 26894004-26894244 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G71360:exon:5 |
1886
|
Chr1: 26891956-26893841 | Arabidopsis thaliana |
| AT1G71360:exon:3 |
221
|
Chr1: 26894004-26894224 | Arabidopsis thaliana |
| AT1G71360:exon:1 |
404
|
Chr1: 26894453-26894856 | Arabidopsis thaliana |
| AT1G71360:exon:4 |
1766
|
Chr1: 26892076-26893841 | Arabidopsis thaliana |
| AT1G71360:exon:2 |
243
|
Chr1: 26894004-26894246 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G71360:five_prime_UTR:3 |
58
|
Chr1: 26894167-26894224 | Arabidopsis thaliana |
| AT1G71360:five_prime_UTR:1 |
404
|
Chr1: 26894453-26894856 | Arabidopsis thaliana |
| AT1G71360:five_prime_UTR:2 |
2
|
Chr1: 26894245-26894246 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT1G71360 | locus:2825334 | AT1G71360 |
2901
|
Chr1: 26891956-26894856 | A. thaliana | Galactose-binding protein;(source:Araport11) | Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. | Galactose-binding protein | AtSUN4, SUN4 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G71360:three_prime_UTR:2 |
258
|
Chr1: 26891956-26892213 | Arabidopsis thaliana |
| AT1G71360:three_prime_UTR:1 |
138
|
Chr1: 26892076-26892213 | Arabidopsis thaliana |
Transposable Elements
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1TE88010 |
336
|
Chr1: 26892363-26892698 | Arabidopsis thaliana |
Transposon Fragments
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1TE88010:transposon_fragment:1 |
336
|
Chr1: 26892363-26892698 | Arabidopsis thaliana |
