Genomics
Genome feature
| Region: |
mRNA
|
Length: |
2388
 |
| Location: | Chr1:20840143-20845280 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G55750:CDS:17 |
168
|
Chr1: 20841322-20841489 | Arabidopsis thaliana |
| AT1G55750:CDS:15 |
174
|
Chr1: 20841584-20841757 | Arabidopsis thaliana |
| AT1G55750:CDS:14 |
128
|
Chr1: 20841842-20841969 | Arabidopsis thaliana |
| AT1G55750:CDS:13 |
57
|
Chr1: 20842054-20842110 | Arabidopsis thaliana |
| AT1G55750:CDS:12 |
124
|
Chr1: 20842260-20842383 | Arabidopsis thaliana |
| AT1G55750:CDS:11 |
66
|
Chr1: 20842885-20842950 | Arabidopsis thaliana |
| AT1G55750:CDS:10 |
156
|
Chr1: 20843048-20843203 | Arabidopsis thaliana |
| AT1G55750:CDS:9 |
57
|
Chr1: 20843303-20843359 | Arabidopsis thaliana |
| AT1G55750:CDS:8 |
45
|
Chr1: 20843708-20843752 | Arabidopsis thaliana |
| AT1G55750:CDS:7 |
96
|
Chr1: 20843969-20844064 | Arabidopsis thaliana |
| AT1G55750:CDS:6 |
76
|
Chr1: 20844144-20844219 | Arabidopsis thaliana |
| AT1G55750:CDS:5 |
115
|
Chr1: 20844314-20844428 | Arabidopsis thaliana |
| AT1G55750:CDS:4 |
64
|
Chr1: 20844528-20844591 | Arabidopsis thaliana |
| AT1G55750:CDS:3 |
62
|
Chr1: 20844699-20844760 | Arabidopsis thaliana |
| AT1G55750:CDS:2 |
79
|
Chr1: 20844890-20844968 | Arabidopsis thaliana |
| AT1G55750:CDS:1 |
81
|
Chr1: 20845055-20845135 | Arabidopsis thaliana |
| AT1G55750:CDS:22 |
87
|
Chr1: 20840449-20840535 | Arabidopsis thaliana |
| AT1G55750:CDS:21 |
69
|
Chr1: 20840696-20840764 | Arabidopsis thaliana |
| AT1G55750:CDS:20 |
48
|
Chr1: 20840975-20841022 | Arabidopsis thaliana |
| AT1G55750:CDS:18 |
78
|
Chr1: 20841184-20841261 | Arabidopsis thaliana |
| AT1G55750:CDS:16 |
114
|
Chr1: 20841376-20841489 | Arabidopsis thaliana |
| AT1G55750:CDS:15.1 |
174
|
Chr1: 20841584-20841757 | Arabidopsis thaliana |
| AT1G55750:CDS:14.1 |
128
|
Chr1: 20841842-20841969 | Arabidopsis thaliana |
| AT1G55750:CDS:13.1 |
57
|
Chr1: 20842054-20842110 | Arabidopsis thaliana |
| AT1G55750:CDS:12.1 |
124
|
Chr1: 20842260-20842383 | Arabidopsis thaliana |
| AT1G55750:CDS:11.1 |
66
|
Chr1: 20842885-20842950 | Arabidopsis thaliana |
| AT1G55750:CDS:10.1 |
156
|
Chr1: 20843048-20843203 | Arabidopsis thaliana |
| AT1G55750:CDS:9.1 |
57
|
Chr1: 20843303-20843359 | Arabidopsis thaliana |
| AT1G55750:CDS:8.1 |
45
|
Chr1: 20843708-20843752 | Arabidopsis thaliana |
| AT1G55750:CDS:7.1 |
96
|
Chr1: 20843969-20844064 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G55750:exon:25 |
445
|
Chr1: 20840091-20840535 | Arabidopsis thaliana |
| AT1G55750:exon:2 |
541
|
Chr1: 20845055-20845595 | Arabidopsis thaliana |
| AT1G55750:exon:22 |
48
|
Chr1: 20840975-20841022 | Arabidopsis thaliana |
| AT1G55750:exon:19 |
78
|
Chr1: 20841184-20841261 | Arabidopsis thaliana |
| AT1G55750:exon:20 |
515
|
Chr1: 20840975-20841489 | Arabidopsis thaliana |
| AT1G55750:exon:24 |
393
|
Chr1: 20840143-20840535 | Arabidopsis thaliana |
| AT1G55750:exon:23 |
69
|
Chr1: 20840696-20840764 | Arabidopsis thaliana |
| AT1G55750:exon:21 |
287
|
Chr1: 20840975-20841261 | Arabidopsis thaliana |
| AT1G55750:exon:18 |
114
|
Chr1: 20841376-20841489 | Arabidopsis thaliana |
| AT1G55750:exon:17 |
174
|
Chr1: 20841584-20841757 | Arabidopsis thaliana |
| AT1G55750:exon:16 |
128
|
Chr1: 20841842-20841969 | Arabidopsis thaliana |
| AT1G55750:exon:15 |
57
|
Chr1: 20842054-20842110 | Arabidopsis thaliana |
| AT1G55750:exon:14 |
124
|
Chr1: 20842260-20842383 | Arabidopsis thaliana |
| AT1G55750:exon:13 |
66
|
Chr1: 20842885-20842950 | Arabidopsis thaliana |
| AT1G55750:exon:12 |
156
|
Chr1: 20843048-20843203 | Arabidopsis thaliana |
| AT1G55750:exon:11 |
57
|
Chr1: 20843303-20843359 | Arabidopsis thaliana |
| AT1G55750:exon:10 |
45
|
Chr1: 20843708-20843752 | Arabidopsis thaliana |
| AT1G55750:exon:9 |
96
|
Chr1: 20843969-20844064 | Arabidopsis thaliana |
| AT1G55750:exon:8 |
76
|
Chr1: 20844144-20844219 | Arabidopsis thaliana |
| AT1G55750:exon:7 |
115
|
Chr1: 20844314-20844428 | Arabidopsis thaliana |
| AT1G55750:exon:6 |
64
|
Chr1: 20844528-20844591 | Arabidopsis thaliana |
| AT1G55750:exon:5 |
62
|
Chr1: 20844699-20844760 | Arabidopsis thaliana |
| AT1G55750:exon:4 |
79
|
Chr1: 20844890-20844968 | Arabidopsis thaliana |
| AT1G55750:exon:3 |
226
|
Chr1: 20845055-20845280 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G55750:five_prime_UTR:2 |
460
|
Chr1: 20845136-20845595 | Arabidopsis thaliana |
| AT1G55750:five_prime_UTR:3 |
145
|
Chr1: 20845136-20845280 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT1G55750 | locus:2020447 | AT1G55750 |
5809
|
Chr1: 20840091-20845899 | A. thaliana | BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins);(source:Araport11) | NULL | BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT1G55750.2 |
2904
|
Chr1: 20840091-20845899 |
| AT1G55750.1 |
2629
|
Chr1: 20840091-20845899 |
| AT1G55750.3 |
2790
|
Chr1: 20840091-20845899 |
| AT1G55750.6 |
2227
|
Chr1: 20840143-20845280 |
| AT1G55750.4 |
2502
|
Chr1: 20840143-20845280 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G55750:three_prime_UTR:7 |
358
|
Chr1: 20840091-20840448 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:6 |
445
|
Chr1: 20840091-20840535 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:5 |
306
|
Chr1: 20840143-20840448 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:1 |
347
|
Chr1: 20840975-20841321 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:4 |
393
|
Chr1: 20840143-20840535 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:3 |
69
|
Chr1: 20840696-20840764 | Arabidopsis thaliana |
| AT1G55750:three_prime_UTR:2 |
146
|
Chr1: 20840975-20841120 | Arabidopsis thaliana |
