Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 8, Exons: 8, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Three Prime UTRs: 3, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55080:CDS:6 | 58 | Chr1: 20553121-20553178 | Arabidopsis thaliana |
AT1G55080:CDS:5 | 59 | Chr1: 20553265-20553323 | Arabidopsis thaliana |
AT1G55080:CDS:3 | 81 | Chr1: 20553403-20553483 | Arabidopsis thaliana |
AT1G55080:CDS:2 | 63 | Chr1: 20553569-20553631 | Arabidopsis thaliana |
AT1G55080:CDS:1 | 474 | Chr1: 20553701-20554174 | Arabidopsis thaliana |
AT1G55080:CDS:4 | 168 | Chr1: 20553316-20553483 | Arabidopsis thaliana |
AT1G55080:CDS:2.1 | 63 | Chr1: 20553569-20553631 | Arabidopsis thaliana |
AT1G55080:CDS:1.1 | 474 | Chr1: 20553701-20554174 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55080:exon:8 | 274 | Chr1: 20552905-20553178 | Arabidopsis thaliana |
AT1G55080:exon:6 | 59 | Chr1: 20553265-20553323 | Arabidopsis thaliana |
AT1G55080:exon:4 | 81 | Chr1: 20553403-20553483 | Arabidopsis thaliana |
AT1G55080:exon:2 | 554 | Chr1: 20553701-20554254 | Arabidopsis thaliana |
AT1G55080:exon:7 | 168 | Chr1: 20553011-20553178 | Arabidopsis thaliana |
AT1G55080:exon:5 | 219 | Chr1: 20553265-20553483 | Arabidopsis thaliana |
AT1G55080:exon:3 | 63 | Chr1: 20553569-20553631 | Arabidopsis thaliana |
AT1G55080:exon:1 | 572 | Chr1: 20553701-20554272 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55080:five_prime_UTR:2 | 80 | Chr1: 20554175-20554254 | Arabidopsis thaliana |
AT1G55080:five_prime_UTR:1 | 98 | Chr1: 20554175-20554272 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G55080 | locus:2205662 | MED9 | 1368 | Chr1: 20552905-20554272 | A. thaliana | mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) | NULL | NULL | MED9 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G55080:three_prime_UTR:3 | 216 | Chr1: 20552905-20553120 | Arabidopsis thaliana |
AT1G55080:three_prime_UTR:2 | 168 | Chr1: 20553011-20553178 | Arabidopsis thaliana |
AT1G55080:three_prime_UTR:1 | 51 | Chr1: 20553265-20553315 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67900 | 228 | Chr1: 20553838-20554065 | Arabidopsis thaliana |
AT1TE67905 | 37 | Chr1: 20554066-20554102 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE67900:transposon_fragment:1 | 228 | Chr1: 20553838-20554065 | Arabidopsis thaliana |
AT1TE67905:transposon_fragment:1 | 37 | Chr1: 20554066-20554102 | Arabidopsis thaliana |