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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 9, Exons: 10, Five Prime UTR: 1, Gene: 1, mRNAs: 2, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52695:CDS:9 | 52 | Chr1: 19621411-19621462 | Arabidopsis thaliana |
AT1G52695:CDS:8 | 91 | Chr1: 19621559-19621649 | Arabidopsis thaliana |
AT1G52695:CDS:7 | 86 | Chr1: 19621798-19621883 | Arabidopsis thaliana |
AT1G52695:CDS:6 | 133 | Chr1: 19621980-19622112 | Arabidopsis thaliana |
AT1G52695:CDS:5 | 105 | Chr1: 19622254-19622358 | Arabidopsis thaliana |
AT1G52695:CDS:4 | 70 | Chr1: 19622488-19622557 | Arabidopsis thaliana |
AT1G52695:CDS:3 | 37 | Chr1: 19622661-19622697 | Arabidopsis thaliana |
AT1G52695:CDS:2 | 112 | Chr1: 19623141-19623252 | Arabidopsis thaliana |
AT1G52695:CDS:1 | 10 | Chr1: 19623379-19623388 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52690:exon:5 | 21 | Chr1: 19621514-19621534 | Arabidopsis thaliana |
AT1G52695:exon:9 | 225 | Chr1: 19621238-19621462 | Arabidopsis thaliana |
AT1G52695:exon:8 | 91 | Chr1: 19621559-19621649 | Arabidopsis thaliana |
AT1G52695:exon:7 | 86 | Chr1: 19621798-19621883 | Arabidopsis thaliana |
AT1G52695:exon:6 | 133 | Chr1: 19621980-19622112 | Arabidopsis thaliana |
AT1G52695:exon:5 | 105 | Chr1: 19622254-19622358 | Arabidopsis thaliana |
AT1G52695:exon:4 | 70 | Chr1: 19622488-19622557 | Arabidopsis thaliana |
AT1G52695:exon:3 | 37 | Chr1: 19622661-19622697 | Arabidopsis thaliana |
AT1G52695:exon:2 | 112 | Chr1: 19623141-19623252 | Arabidopsis thaliana |
AT1G52695:exon:1 | 83 | Chr1: 19623379-19623461 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52695:five_prime_UTR:1 | 73 | Chr1: 19623389-19623461 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G52690 | locus:2035109 | LEA7 | LATE EMBRYOGENESIS ABUNDANT 7 | 1811 | Chr1: 19619724-19621534 | A. thaliana | Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) | Intrinsically disordered protein that stabilizes lactate dehydrogenase (LDH) during drying and freezing. | Late embryogenesis abundant protein (LEA) family protein | LEA7 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G52690.2 | 830 | Chr1: 19619724-19621534 |
AT1G52695.1 | 942 | Chr1: 19621238-19623461 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52690:three_prime_UTR:3 | 21 | Chr1: 19621514-19621534 | Arabidopsis thaliana |
AT1G52695:three_prime_UTR:1 | 173 | Chr1: 19621238-19621410 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE64900 | 207 | Chr1: 19623284-19623490 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE64900:transposon_fragment:1 | 207 | Chr1: 19623284-19623490 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
hydrolase activity | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...