Genomics
Transcript | Exons | Introns | ||||||
---|---|---|---|---|---|---|---|---|
AT1G49500.1
AT1G49500.1
1057 |
|
|
||||||
AT1G49500.2
AT1G49500.2
1241 |
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 2, Exons: 3, Five Prime UTRs: 2, Gene: 1, mRNA: 1, Three Prime UTRs: 3, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G49500:CDS:1 | 192 | Chr1: 18321988-18322179 | Arabidopsis thaliana |
AT1G49500:CDS:1.1 | 192 | Chr1: 18321988-18322179 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G49500:exon:3 | 187 | Chr1: 18320490-18320676 | Arabidopsis thaliana |
AT1G49500:exon:1 | 870 | Chr1: 18321415-18322284 | Arabidopsis thaliana |
AT1G49500:exon:2 | 1241 | Chr1: 18321265-18322505 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G49500:five_prime_UTR:2 | 105 | Chr1: 18322180-18322284 | Arabidopsis thaliana |
AT1G49500:five_prime_UTR:1 | 326 | Chr1: 18322180-18322505 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G49500 | locus:2010232 | AT1G49500 | 2016 | Chr1: 18320490-18322505 | A. thaliana | transcription initiation factor TFIID subunit 1b-like protein;(source:Araport11) | NULL | NULL |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G49500:three_prime_UTR:3 | 187 | Chr1: 18320490-18320676 | Arabidopsis thaliana |
AT1G49500:three_prime_UTR:1 | 573 | Chr1: 18321415-18321987 | Arabidopsis thaliana |
AT1G49500:three_prime_UTR:2 | 723 | Chr1: 18321265-18321987 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE60720 | 67 | Chr1: 18320603-18320669 | Arabidopsis thaliana |
AT1TE60725 | 508 | Chr1: 18320670-18321177 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE60720:transposon_fragment:1 | 67 | Chr1: 18320603-18320669 | Arabidopsis thaliana |
AT1TE60725:transposon_fragment:1 | 508 | Chr1: 18320670-18321177 | Arabidopsis thaliana |