Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons: 2, Intergenic Regions: 2, mRNAs: 2, Transposable Elements: 2, Transposable Element Genes: 2, Transposon Fragments: 6
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G37063:exon:1 | 756 | Chr1: 14101593-14102348 | Arabidopsis thaliana |
AT1G37070:exon:1 | 2634 | Chr1: 14103157-14105790 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr1_14102349..14103156 | 808 | Chr1: 14102349-14103156 | Arabidopsis thaliana |
intergenic_region_chrChr1_14105791..14111457 | 5667 | Chr1: 14105791-14111457 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G37063.1 | 756 | Chr1: 14101593-14102348 |
AT1G37070.1 | 2634 | Chr1: 14103157-14105790 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE46315 | 281 | Chr1: 14102480-14102760 | Arabidopsis thaliana |
AT1TE46320 | 51 | Chr1: 14104486-14104536 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G37063 | locus:2825639 | AT1G37063 | 756 | Chr1: 14101593-14102348 | A. thaliana | transposable_element_gene;(source:Araport11);transposase-related, weak similarity to Tam3-transposase (Antirrhinum majus) GI:16064, PIR|A39652 Hobo element transposase HFL1 (Drosophila melanogaster);(source:TAIR10) | NULL | transposable element gene | ||
AT1G37070 | locus:2029687 | AT1G37070 | 2634 | Chr1: 14103157-14105790 | A. thaliana | transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family (Athila), has a 5.5e-177 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE46310:transposon_fragment:4 | 205 | Chr1: 14101823-14102027 | Arabidopsis thaliana |
AT1TE46310:transposon_fragment:3 | 1500 | Chr1: 14102986-14104485 | Arabidopsis thaliana |
AT1TE46310:transposon_fragment:2 | 1255 | Chr1: 14104537-14105791 | Arabidopsis thaliana |
AT1TE46310:transposon_fragment:1 | 1782 | Chr1: 14105792-14107573 | Arabidopsis thaliana |
AT1TE46315:transposon_fragment:1 | 281 | Chr1: 14102480-14102760 | Arabidopsis thaliana |
AT1TE46320:transposon_fragment:1 | 51 | Chr1: 14104486-14104536 | Arabidopsis thaliana |