Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AT1G27090.1
AT1G27090.1
1822 |
|
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27080:CDS:5 | 874 | Chr1: 9402916-9403789 | Arabidopsis thaliana |
AT1G27080:CDS:5.1 | 874 | Chr1: 9402916-9403789 | Arabidopsis thaliana |
AT1G27090:CDS:4 | 357 | Chr1: 9404041-9404397 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27080:exon:5 | 990 | Chr1: 9402916-9403905 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G27080 | locus:2205719 | NRT1.6 | nitrate transporter 1.6 | 3580 | Chr1: 9400326-9403905 | A. thaliana | nitrate transporter 1.6;(source:Araport11) | Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion. | nitrate transporter 1.6 | AtNPF2.12, NPF2.12, NRT1.6 |
AT1G27090 | locus:2205729 | AT1G27090 | 2617 | Chr1: 9403753-9406369 | A. thaliana | glycine-rich protein;(source:Araport11) | NULL | glycine-rich protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G27080.1 | 2185 | Chr1: 9400326-9403905 |
AT1G27080.2 | 2256 | Chr1: 9401097-9403905 |
AT1G27090.1 | 1822 | Chr1: 9403753-9406369 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27080:three_prime_UTR:1 | 116 | Chr1: 9403790-9403905 | Arabidopsis thaliana |
AT1G27090:three_prime_UTR:1 | 288 | Chr1: 9403753-9404040 | Arabidopsis thaliana |