Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs: 15, Exons: 9, Five Prime UTRs: 4, Gene: 1, mRNAs: 4, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23060:CDS:5 | 327 | Chr1: 8170946-8171272 | Arabidopsis thaliana |
AT1G23060:CDS:4 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:CDS:2 | 566 | Chr1: 8171619-8172184 | Arabidopsis thaliana |
AT1G23060:CDS:5.1 | 327 | Chr1: 8170946-8171272 | Arabidopsis thaliana |
AT1G23060:CDS:4.1 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:CDS:3 | 425 | Chr1: 8171619-8172043 | Arabidopsis thaliana |
AT1G23060:CDS:5.2 | 327 | Chr1: 8170946-8171272 | Arabidopsis thaliana |
AT1G23060:CDS:4.2 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:CDS:2.1 | 566 | Chr1: 8171619-8172184 | Arabidopsis thaliana |
AT1G23060:CDS:5.3 | 327 | Chr1: 8170946-8171272 | Arabidopsis thaliana |
AT1G23060:CDS:4.3 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:CDS:3.1 | 425 | Chr1: 8171619-8172043 | Arabidopsis thaliana |
AT1G23060:CDS:5.4 | 327 | Chr1: 8170946-8171272 | Arabidopsis thaliana |
AT1G23060:CDS:4.4 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:CDS:3.2 | 425 | Chr1: 8171619-8172043 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23060:exon:12 | 580 | Chr1: 8170693-8171272 | Arabidopsis thaliana |
AT1G23060:exon:4 | 302 | Chr1: 8172395-8172696 | Arabidopsis thaliana |
AT1G23060:exon:11 | 554 | Chr1: 8170719-8171272 | Arabidopsis thaliana |
AT1G23060:exon:10 | 544 | Chr1: 8170729-8171272 | Arabidopsis thaliana |
AT1G23060:exon:6 | 903 | Chr1: 8171619-8172521 | Arabidopsis thaliana |
AT1G23060:exon:9 | 531 | Chr1: 8170742-8171272 | Arabidopsis thaliana |
AT1G23060:exon:8 | 169 | Chr1: 8171364-8171532 | Arabidopsis thaliana |
AT1G23060:exon:7 | 566 | Chr1: 8171619-8172184 | Arabidopsis thaliana |
AT1G23060:exon:5 | 149 | Chr1: 8172336-8172484 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23060:five_prime_UTR:4 | 302 | Chr1: 8172395-8172696 | Arabidopsis thaliana |
AT1G23060:five_prime_UTR:6 | 478 | Chr1: 8172044-8172521 | Arabidopsis thaliana |
AT1G23060:five_prime_UTR:7 | 141 | Chr1: 8172044-8172184 | Arabidopsis thaliana |
AT1G23060:five_prime_UTR:5 | 149 | Chr1: 8172336-8172484 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G23060 | locus:2201240 | MDP40 | MICROTUBULE DESTABILIZING PROTEIN 40 | 2393 | Chr1: 8170693-8173085 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL | MDP40 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G23060.1 | 1607 | Chr1: 8170693-8173085 |
AT1G23060.3 | 1591 | Chr1: 8170719-8172696 |
AT1G23060.4 | 1409 | Chr1: 8170719-8172817 |
AT1G23060.2 | 1415 | Chr1: 8170742-8172484 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23060:three_prime_UTR:4 | 253 | Chr1: 8170693-8170945 | Arabidopsis thaliana |
AT1G23060:three_prime_UTR:3 | 227 | Chr1: 8170719-8170945 | Arabidopsis thaliana |
AT1G23060:three_prime_UTR:2 | 217 | Chr1: 8170729-8170945 | Arabidopsis thaliana |
AT1G23060:three_prime_UTR:1 | 204 | Chr1: 8170742-8170945 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE26305 | 1225 | Chr1: 8169559-8170783 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE26305:transposon_fragment:1 | 1225 | Chr1: 8169559-8170783 | Arabidopsis thaliana |