Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
Antisense lncRNA: 1, CDSs: 14, Exons: 15, Five Prime UTRs: 6, Genes: 4, mRNAs: 6, Three Prime UTRs: 6
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G20065:CDS:1 | 118 | Chr1: 6956973-6957090 | Arabidopsis thaliana |
AT1G20065:CDS:2 | 41 | Chr1: 6957191-6957231 | Arabidopsis thaliana |
AT1G20065:CDS:4 | 33 | Chr1: 6957529-6957561 | Arabidopsis thaliana |
AT1G20065:CDS:1.1 | 118 | Chr1: 6956973-6957090 | Arabidopsis thaliana |
AT1G20065:CDS:2.1 | 41 | Chr1: 6957191-6957231 | Arabidopsis thaliana |
AT1G20065:CDS:4.1 | 33 | Chr1: 6957529-6957561 | Arabidopsis thaliana |
AT1G20065:CDS:1.2 | 118 | Chr1: 6956973-6957090 | Arabidopsis thaliana |
AT1G20065:CDS:2.2 | 41 | Chr1: 6957191-6957231 | Arabidopsis thaliana |
AT1G20065:CDS:4.2 | 33 | Chr1: 6957529-6957561 | Arabidopsis thaliana |
AT1G20065:CDS:1.3 | 118 | Chr1: 6956973-6957090 | Arabidopsis thaliana |
AT1G20065:CDS:3 | 158 | Chr1: 6957191-6957348 | Arabidopsis thaliana |
AT1G20065:CDS:1.4 | 118 | Chr1: 6956973-6957090 | Arabidopsis thaliana |
AT1G20065:CDS:2.3 | 41 | Chr1: 6957191-6957231 | Arabidopsis thaliana |
AT1G20065:CDS:4.3 | 33 | Chr1: 6957529-6957561 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G20060:exon:1 | 632 | Chr1: 6955769-6956400 | Arabidopsis thaliana |
AT1G20065:exon:1 | 255 | Chr1: 6956374-6956628 | Arabidopsis thaliana |
AT1G20065:exon:9 | 64 | Chr1: 6957529-6957592 | Arabidopsis thaliana |
AT1G20065:exon:11 | 57 | Chr1: 6957677-6957733 | Arabidopsis thaliana |
AT1G20065:exon:12 | 259 | Chr1: 6957817-6958075 | Arabidopsis thaliana |
AT1G20065:exon:3 | 621 | Chr1: 6956470-6957090 | Arabidopsis thaliana |
AT1G20065:exon:2 | 154 | Chr1: 6956470-6956623 | Arabidopsis thaliana |
AT1G20065:exon:8 | 33 | Chr1: 6957529-6957561 | Arabidopsis thaliana |
AT1G20065:exon:7 | 272 | Chr1: 6957191-6957462 | Arabidopsis thaliana |
AT1G20065:exon:4 | 65 | Chr1: 6956521-6956585 | Arabidopsis thaliana |
AT1G20065:exon:5 | 126 | Chr1: 6956965-6957090 | Arabidopsis thaliana |
AT1G20065:exon:6 | 41 | Chr1: 6957191-6957231 | Arabidopsis thaliana |
AT1G20065:exon:10 | 129 | Chr1: 6957529-6957657 | Arabidopsis thaliana |
AT1G05523:exon:1 | 1157 | Chr1: 6957968-6959124 | Arabidopsis thaliana |
AT1G20070:exon:1 | 1114 | Chr1: 6958010-6959123 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G20060:five_prime_UTR:1 | 107 | Chr1: 6956294-6956400 | Arabidopsis thaliana |
AT1G20065:five_prime_UTR:1 | 255 | Chr1: 6956374-6956628 | Arabidopsis thaliana |
AT1G20065:five_prime_UTR:3 | 503 | Chr1: 6956470-6956972 | Arabidopsis thaliana |
AT1G20065:five_prime_UTR:2 | 154 | Chr1: 6956470-6956623 | Arabidopsis thaliana |
AT1G20065:five_prime_UTR:4 | 65 | Chr1: 6956521-6956585 | Arabidopsis thaliana |
AT1G20065:five_prime_UTR:5 | 8 | Chr1: 6956965-6956972 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G20060 | locus:2198611 | AT1G20060 | 6008 | Chr1: 6950393-6956400 | A. thaliana | ATP binding microtubule motor family protein;(source:Araport11) | NULL | ATP binding microtubule motor family protein | ||
AT1G20065 | locus:4010713455 | AT1G20065 | 1702 | Chr1: 6956374-6958075 | A. thaliana | DNA-directed RNA polymerase I subunit RPA12-like protein;(source:Araport11) | NULL | NULL | ||
AT1G05523 | AT1G05523 | 1157 | Chr1: 6957968-6959124 | A. thaliana | Natural antisense transcript overlaps with AT1G20070;(source:Araport11) | NULL | ||||
AT1G20070 | locus:2198596 | AT1G20070 | 1139 | Chr1: 6958010-6959148 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G20060.9 | 2962 | Chr1: 6950655-6956400 |
AT1G20065.3 | 695 | Chr1: 6956470-6957561 |
AT1G20065.4 | 354 | Chr1: 6956470-6957561 |
AT1G20065.2 | 463 | Chr1: 6956521-6957462 |
AT1G20065.5 | 361 | Chr1: 6956521-6957657 |
AT1G20070.1 | 1114 | Chr1: 6958010-6959148 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G20065:three_prime_UTR:2 | 31 | Chr1: 6957562-6957592 | Arabidopsis thaliana |
AT1G20065:three_prime_UTR:4 | 57 | Chr1: 6957677-6957733 | Arabidopsis thaliana |
AT1G20065:three_prime_UTR:5 | 259 | Chr1: 6957817-6958075 | Arabidopsis thaliana |
AT1G20065:three_prime_UTR:1 | 114 | Chr1: 6957349-6957462 | Arabidopsis thaliana |
AT1G20065:three_prime_UTR:3 | 96 | Chr1: 6957562-6957657 | Arabidopsis thaliana |
AT1G20070:three_prime_UTR:1 | 234 | Chr1: 6958010-6958243 | Arabidopsis thaliana |