Genomics
Transcript | Exons | Introns | ||||||
---|---|---|---|---|---|---|---|---|
AT1G17610.1
AT1G17610.1
2445 |
|
|
||||||
AT1G17610.2
AT1G17610.2
1571 |
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17600:CDS:2 | 1102 | Chr1: 6054908-6056009 | Arabidopsis thaliana |
AT1G17600:CDS:1 | 464 | Chr1: 6056109-6056572 | Arabidopsis thaliana |
AT1G17610:CDS:1 | 1263 | Chr1: 6056895-6058157 | Arabidopsis thaliana |
AT1G17610:CDS:1.1 | 1263 | Chr1: 6056895-6058157 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17600:exon:2 | 1102 | Chr1: 6054908-6056009 | Arabidopsis thaliana |
AT1G17600:exon:1 | 2006 | Chr1: 6056109-6058114 | Arabidopsis thaliana |
AT1G17610:exon:1 | 982 | Chr1: 6054922-6055903 | Arabidopsis thaliana |
AT1G17610:exon:3 | 1463 | Chr1: 6056895-6058357 | Arabidopsis thaliana |
AT1G17610:exon:2 | 1571 | Chr1: 6056787-6058357 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17600:five_prime_UTR:1 | 1542 | Chr1: 6056573-6058114 | Arabidopsis thaliana |
AT1G17610:five_prime_UTR:1 | 982 | Chr1: 6054922-6055903 | Arabidopsis thaliana |
AT1G17610:five_prime_UTR:2 | 862 | Chr1: 6056033-6056894 | Arabidopsis thaliana |
AT1G17610:five_prime_UTR:3 | 108 | Chr1: 6056787-6056894 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G17600 | locus:2007863 | AT1G17600 | 5179 | Chr1: 6052936-6058114 | A. thaliana | Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) | SOC3 is a TIR-NB-leucine-rich repeat (TNL) protein.Mutants suppress loss of chs2 phenotype of auto-activation of immunity. When the TIR domain of SOC3 interacts with CHS2 the binding results in temperature activation of cell death, the suppressors inhibit this interaction. | Disease resistance protein (TIR-NBS-LRR class) family | SOC3 | |
AT1G17610 | locus:2007873 | AT1G17610 | 3436 | Chr1: 6054922-6058357 | A. thaliana | Disease resistance protein (TIR-NBS class);(source:Araport11) | TN-type protein that controls temperature-dependent growth and defense responses .Mutant accumulates steryl-esters at low temperatures and shows temperature dependent activation of defense responses.. | Disease resistance protein (TIR-NBS class) | CHS1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G17600.1 | 4782 | Chr1: 6052936-6058114 |
AT1G17610.2 | 1571 | Chr1: 6056787-6058357 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17610:three_prime_UTR:1 | 200 | Chr1: 6058158-6058357 | Arabidopsis thaliana |