Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16190:CDS:1 | 66 | Chr1: 5543267-5543332 | Arabidopsis thaliana |
AT1G16190:CDS:2 | 162 | Chr1: 5543606-5543767 | Arabidopsis thaliana |
AT1G16190:CDS:4 | 39 | Chr1: 5544064-5544102 | Arabidopsis thaliana |
AT1G16190:CDS:5 | 39 | Chr1: 5544192-5544230 | Arabidopsis thaliana |
AT1G16190:CDS:6 | 74 | Chr1: 5544317-5544390 | Arabidopsis thaliana |
AT1G16190:CDS:7 | 178 | Chr1: 5544484-5544661 | Arabidopsis thaliana |
AT1G16190:CDS:8 | 123 | Chr1: 5544739-5544861 | Arabidopsis thaliana |
AT1G16190:CDS:9 | 66 | Chr1: 5544950-5545015 | Arabidopsis thaliana |
AT1G16190:CDS:10 | 48 | Chr1: 5545219-5545266 | Arabidopsis thaliana |
AT1G16190:CDS:11 | 110 | Chr1: 5545344-5545453 | Arabidopsis thaliana |
AT1G16190:CDS:12 | 85 | Chr1: 5545599-5545683 | Arabidopsis thaliana |
AT1G16190:CDS:13 | 117 | Chr1: 5545776-5545892 | Arabidopsis thaliana |
AT1G16190:CDS:3 | 159 | Chr1: 5543609-5543767 | Arabidopsis thaliana |
AT1G16190:CDS:4.1 | 39 | Chr1: 5544064-5544102 | Arabidopsis thaliana |
AT1G16190:CDS:5.1 | 39 | Chr1: 5544192-5544230 | Arabidopsis thaliana |
AT1G16190:CDS:6.1 | 74 | Chr1: 5544317-5544390 | Arabidopsis thaliana |
AT1G16190:CDS:7.1 | 178 | Chr1: 5544484-5544661 | Arabidopsis thaliana |
AT1G16190:CDS:8.1 | 123 | Chr1: 5544739-5544861 | Arabidopsis thaliana |
AT1G16190:CDS:9.1 | 66 | Chr1: 5544950-5545015 | Arabidopsis thaliana |
AT1G16190:CDS:10.1 | 48 | Chr1: 5545219-5545266 | Arabidopsis thaliana |
AT1G16190:CDS:11.1 | 110 | Chr1: 5545344-5545453 | Arabidopsis thaliana |
AT1G16190:CDS:12.1 | 85 | Chr1: 5545599-5545683 | Arabidopsis thaliana |
AT1G16190:CDS:13.1 | 117 | Chr1: 5545776-5545892 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16190:exon:1 | 214 | Chr1: 5543119-5543332 | Arabidopsis thaliana |
AT1G16190:exon:3 | 162 | Chr1: 5543606-5543767 | Arabidopsis thaliana |
AT1G16190:exon:2 | 622 | Chr1: 5543146-5543767 | Arabidopsis thaliana |
AT1G16190:exon:4 | 39 | Chr1: 5544064-5544102 | Arabidopsis thaliana |
AT1G16190:exon:5 | 39 | Chr1: 5544192-5544230 | Arabidopsis thaliana |
AT1G16190:exon:6 | 74 | Chr1: 5544317-5544390 | Arabidopsis thaliana |
AT1G16190:exon:7 | 178 | Chr1: 5544484-5544661 | Arabidopsis thaliana |
AT1G16190:exon:8 | 123 | Chr1: 5544739-5544861 | Arabidopsis thaliana |
AT1G16190:exon:9 | 66 | Chr1: 5544950-5545015 | Arabidopsis thaliana |
AT1G16190:exon:10 | 48 | Chr1: 5545219-5545266 | Arabidopsis thaliana |
AT1G16190:exon:11 | 110 | Chr1: 5545344-5545453 | Arabidopsis thaliana |
AT1G16190:exon:12 | 85 | Chr1: 5545599-5545683 | Arabidopsis thaliana |
AT1G16190:exon:13 | 328 | Chr1: 5545776-5546103 | Arabidopsis thaliana |
AT1G16210:exon:3 | 280 | Chr1: 5546099-5546378 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16190:five_prime_UTR:1 | 148 | Chr1: 5543119-5543266 | Arabidopsis thaliana |
AT1G16190:five_prime_UTR:2 | 463 | Chr1: 5543146-5543608 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G16190 | locus:2200522 | RAD23A | RADIATION SENSITIVE23A | 2985 | Chr1: 5543119-5546103 | A. thaliana | Rad23 UV excision repair protein family;(source:Araport11) | Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. | Rad23 UV excision repair protein family | RAD23A |
AT1G16210 | locus:2032845 | AT1G16210 | 1655 | Chr1: 5546099-5547753 | A. thaliana | coiled-coil protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G16190.2 | 1712 | Chr1: 5543146-5546103 |
AT1G16210.1 | 1264 | Chr1: 5546099-5547753 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16190:three_prime_UTR:1 | 211 | Chr1: 5545893-5546103 | Arabidopsis thaliana |
AT1G16210:three_prime_UTR:1 | 253 | Chr1: 5546099-5546351 | Arabidopsis thaliana |