Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
BPC2
AT1G14685.1
1536 |
|
|
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BPC2
AT1G14685.4
1564 |
|
|
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BPC2
AT1G14685.2
1512 |
|
|
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BPC2
AT1G14685.3
1707 |
|
Overlapping Features
Genome features that overlap coordinates of this Exon
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G14685:CDS:1 | 840 | Chr1: 5043086-5043925 | Arabidopsis thaliana |
AT1G14685:CDS:1.1 | 840 | Chr1: 5043086-5043925 | Arabidopsis thaliana |
AT1G14685:CDS:1.2 | 840 | Chr1: 5043086-5043925 | Arabidopsis thaliana |
AT1G14685:CDS:1.3 | 840 | Chr1: 5043086-5043925 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G14685:exon:6 | 1218 | Chr1: 5043077-5044294 | Arabidopsis thaliana |
AT1G14685:exon:4 | 1707 | Chr1: 5042588-5044294 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G14685:five_prime_UTR:5 | 9 | Chr1: 5043077-5043085 | Arabidopsis thaliana |
AT1G14685:five_prime_UTR:4 | 524 | Chr1: 5042562-5043085 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G14685 | locus:2823945 | BPC2 | basic pentacysteine 2 | 3317 | Chr1: 5042240-5045556 | A. thaliana | basic pentacysteine 2;(source:Araport11) | Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development.Along with BPC1, BPC2 binds to the promoter of and represses GALS1 thereby reducing beta 1,4- galactan accumulation. | basic pentacysteine 2 | ATBPC2, BBR/BPC2, BPC2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G14685.1 | 1536 | Chr1: 5042240-5044294 |
AT1G14685.4 | 1564 | Chr1: 5042535-5045556 |
AT1G14685.2 | 1512 | Chr1: 5042562-5044294 |
AT1G14685.3 | 1707 | Chr1: 5042562-5044294 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G14685:three_prime_UTR:1 | 149 | Chr1: 5043926-5044074 | Arabidopsis thaliana |
AT1G14685:three_prime_UTR:2 | 369 | Chr1: 5043926-5044294 | Arabidopsis thaliana |