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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13990:CDS:1 | 382 | Chr1: 4794810-4795191 | Arabidopsis thaliana |
AT1G13990:CDS:6 | 100 | Chr1: 4795779-4795878 | Arabidopsis thaliana |
AT1G13990:CDS:8 | 118 | Chr1: 4795960-4796077 | Arabidopsis thaliana |
AT1G13990:CDS:9 | 96 | Chr1: 4796155-4796250 | Arabidopsis thaliana |
AT1G13990:CDS:10 | 138 | Chr1: 4796339-4796476 | Arabidopsis thaliana |
AT1G13990:CDS:1.1 | 382 | Chr1: 4794810-4795191 | Arabidopsis thaliana |
AT1G13990:CDS:2 | 38 | Chr1: 4795282-4795319 | Arabidopsis thaliana |
AT1G13990:CDS:3 | 46 | Chr1: 4795494-4795539 | Arabidopsis thaliana |
AT1G13990:CDS:6.1 | 100 | Chr1: 4795779-4795878 | Arabidopsis thaliana |
AT1G13990:CDS:8.1 | 118 | Chr1: 4795960-4796077 | Arabidopsis thaliana |
AT1G13990:CDS:9.1 | 96 | Chr1: 4796155-4796250 | Arabidopsis thaliana |
AT1G13990:CDS:10.1 | 138 | Chr1: 4796339-4796476 | Arabidopsis thaliana |
AT1G13990:CDS:1.2 | 382 | Chr1: 4794810-4795191 | Arabidopsis thaliana |
AT1G13990:CDS:2.1 | 38 | Chr1: 4795282-4795319 | Arabidopsis thaliana |
AT1G13990:CDS:4 | 72 | Chr1: 4795494-4795565 | Arabidopsis thaliana |
AT1G13990:CDS:5 | 38 | Chr1: 4795779-4795816 | Arabidopsis thaliana |
AT1G13990:CDS:7 | 163 | Chr1: 4795915-4796077 | Arabidopsis thaliana |
AT1G13990:CDS:9.2 | 96 | Chr1: 4796155-4796250 | Arabidopsis thaliana |
AT1G13990:CDS:10.2 | 138 | Chr1: 4796339-4796476 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13990:exon:1 | 528 | Chr1: 4794664-4795191 | Arabidopsis thaliana |
AT1G13990:exon:12 | 261 | Chr1: 4796339-4796599 | Arabidopsis thaliana |
AT1G13990:exon:4 | 46 | Chr1: 4795494-4795539 | Arabidopsis thaliana |
AT1G13990:exon:7 | 100 | Chr1: 4795779-4795878 | Arabidopsis thaliana |
AT1G13990:exon:9 | 118 | Chr1: 4795960-4796077 | Arabidopsis thaliana |
AT1G13990:exon:2 | 436 | Chr1: 4794756-4795191 | Arabidopsis thaliana |
AT1G13990:exon:3 | 38 | Chr1: 4795282-4795319 | Arabidopsis thaliana |
AT1G13990:exon:5 | 72 | Chr1: 4795494-4795565 | Arabidopsis thaliana |
AT1G13990:exon:6 | 38 | Chr1: 4795779-4795816 | Arabidopsis thaliana |
AT1G13990:exon:8 | 163 | Chr1: 4795915-4796077 | Arabidopsis thaliana |
AT1G13990:exon:10 | 96 | Chr1: 4796155-4796250 | Arabidopsis thaliana |
AT1G13990:exon:11 | 256 | Chr1: 4796339-4796594 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13990:five_prime_UTR:1 | 146 | Chr1: 4794664-4794809 | Arabidopsis thaliana |
AT1G13990:five_prime_UTR:2 | 54 | Chr1: 4794756-4794809 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G13990.1 | 1103 | Chr1: 4794664-4796599 |
AT1G13990.2 | 1090 | Chr1: 4794756-4796594 |
AT1G13990.3 | 1099 | Chr1: 4794756-4796594 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13990:three_prime_UTR:2 | 123 | Chr1: 4796477-4796599 | Arabidopsis thaliana |
AT1G13990:three_prime_UTR:1 | 118 | Chr1: 4796477-4796594 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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