Genomics
Gene models -
Gene models
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Overlapping Features
Genome features that overlap coordinates of this ThreePrimeUTR
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G09050:exon:5 | 2278 | Chr1: 2918834-2921111 | Arabidopsis thaliana |
AT1G09050:exon:4 | 2086 | Chr1: 2918834-2920919 | Arabidopsis thaliana |
AT1G09060:exon:18 | 274 | Chr1: 2921064-2921337 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G09050 | locus:2036019 | AT1G09050 | 4144 | Chr1: 2916968-2921111 | A. thaliana | arginine-glutamic acid dipeptide repeat protein;(source:Araport11) | NULL | NULL | SANT1 | |
AT1G09060 | locus:2036014 | AT1G09060 | 4763 | Chr1: 2921064-2925826 | A. thaliana | JmjC domain protein JMJ24;(source:Araport11) | JMJ24 is a nuclear localized JmjC domain containing protein. It has been shown to bind to transcribed regions AtSN1 and solo LTR and the promoter of SDC. JMJ24 appears to regulate basal levels of transcription of silenced loci in part by controlling methylation in heterochromatic regions. | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase | JMJ24 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G09050.1 | 3216 | Chr1: 2916968-2921111 |
AT1G09050.2 | 2833 | Chr1: 2918010-2920919 |
AT1G09060.3 | 3077 | Chr1: 2921064-2925325 |
AT1G09060.4 | 3085 | Chr1: 2921064-2925756 |
AT1G09060.2 | 3134 | Chr1: 2921064-2925821 |
AT1G09060.1 | 3115 | Chr1: 2921064-2925826 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G09050:three_prime_UTR:1 | 61 | Chr1: 2920859-2920919 | Arabidopsis thaliana |
AT1G09060:three_prime_UTR:1 | 171 | Chr1: 2921064-2921234 | Arabidopsis thaliana |