Genomics
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G07840:CDS:1 | 44 | Chr1: 2424603-2424646 | Arabidopsis thaliana |
AT1G07840:CDS:2 | 88 | Chr1: 2424839-2424926 | Arabidopsis thaliana |
AT1G07840:CDS:3 | 180 | Chr1: 2425169-2425348 | Arabidopsis thaliana |
AT1G07840:CDS:4 | 180 | Chr1: 2425432-2425611 | Arabidopsis thaliana |
AT1G07840:CDS:5 | 168 | Chr1: 2425695-2425862 | Arabidopsis thaliana |
AT1G07840:CDS:6 | 152 | Chr1: 2425952-2426103 | Arabidopsis thaliana |
AT1G07840:CDS:8 | 115 | Chr1: 2426192-2426306 | Arabidopsis thaliana |
AT1G07840:CDS:9 | 12 | Chr1: 2426414-2426425 | Arabidopsis thaliana |
AT1G07840:CDS:1.1 | 44 | Chr1: 2424603-2424646 | Arabidopsis thaliana |
AT1G07840:CDS:2.1 | 88 | Chr1: 2424839-2424926 | Arabidopsis thaliana |
AT1G07840:CDS:3.1 | 180 | Chr1: 2425169-2425348 | Arabidopsis thaliana |
AT1G07840:CDS:4.1 | 180 | Chr1: 2425432-2425611 | Arabidopsis thaliana |
AT1G07840:CDS:5.1 | 168 | Chr1: 2425695-2425862 | Arabidopsis thaliana |
AT1G07840:CDS:7 | 180 | Chr1: 2425952-2426131 | Arabidopsis thaliana |
AT1G07840:CDS:1.2 | 44 | Chr1: 2424603-2424646 | Arabidopsis thaliana |
AT1G07840:CDS:2.2 | 88 | Chr1: 2424839-2424926 | Arabidopsis thaliana |
AT1G07840:CDS:3.2 | 180 | Chr1: 2425169-2425348 | Arabidopsis thaliana |
AT1G07840:CDS:4.2 | 180 | Chr1: 2425432-2425611 | Arabidopsis thaliana |
AT1G07840:CDS:5.2 | 168 | Chr1: 2425695-2425862 | Arabidopsis thaliana |
AT1G07840:CDS:6.1 | 152 | Chr1: 2425952-2426103 | Arabidopsis thaliana |
AT1G07840:CDS:8.1 | 115 | Chr1: 2426192-2426306 | Arabidopsis thaliana |
AT1G07840:CDS:9.1 | 12 | Chr1: 2426414-2426425 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G07840:exon:1 | 109 | Chr1: 2424045-2424153 | Arabidopsis thaliana |
AT1G07840:exon:13 | 315 | Chr1: 2426414-2426728 | Arabidopsis thaliana |
AT1G07840:exon:2 | 100 | Chr1: 2424054-2424153 | Arabidopsis thaliana |
AT1G07840:exon:10 | 355 | Chr1: 2425952-2426306 | Arabidopsis thaliana |
AT1G07840:exon:3 | 211 | Chr1: 2424064-2424274 | Arabidopsis thaliana |
AT1G07840:exon:4 | 76 | Chr1: 2424571-2424646 | Arabidopsis thaliana |
AT1G07840:exon:5 | 88 | Chr1: 2424839-2424926 | Arabidopsis thaliana |
AT1G07840:exon:6 | 180 | Chr1: 2425169-2425348 | Arabidopsis thaliana |
AT1G07840:exon:7 | 180 | Chr1: 2425432-2425611 | Arabidopsis thaliana |
AT1G07840:exon:8 | 168 | Chr1: 2425695-2425862 | Arabidopsis thaliana |
AT1G07840:exon:9 | 152 | Chr1: 2425952-2426103 | Arabidopsis thaliana |
AT1G07840:exon:11 | 115 | Chr1: 2426192-2426306 | Arabidopsis thaliana |
AT1G07840:exon:12 | 263 | Chr1: 2426414-2426676 | Arabidopsis thaliana |
AT1G07850:exon:1 | 597 | Chr1: 2426705-2427301 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G07840:five_prime_UTR:1 | 109 | Chr1: 2424045-2424153 | Arabidopsis thaliana |
AT1G07840:five_prime_UTR:2 | 100 | Chr1: 2424054-2424153 | Arabidopsis thaliana |
AT1G07840:five_prime_UTR:3 | 211 | Chr1: 2424064-2424274 | Arabidopsis thaliana |
AT1G07840:five_prime_UTR:4 | 32 | Chr1: 2424571-2424602 | Arabidopsis thaliana |
AT1G07850:five_prime_UTR:1 | 40 | Chr1: 2426705-2426744 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G07840 | locus:2026530 | AT1G07840 | 2684 | Chr1: 2424045-2426728 | A. thaliana | Sas10/Utp3/C1D family;(source:Araport11) | NULL | Sas10/Utp3/C1D family | ||
AT1G07850 | locus:2026514 | AT1G07850 | 2521 | Chr1: 2426705-2429225 | A. thaliana | transferring glycosyl group transferase (DUF604);(source:Araport11) | NULL | Protein of unknown function (DUF604) |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G07840.3 | 1410 | Chr1: 2424054-2426676 |
AT1G07840.2 | 1433 | Chr1: 2424064-2426676 |
AT1G07850.1 | 2172 | Chr1: 2426705-2429225 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G07840:three_prime_UTR:4 | 303 | Chr1: 2426426-2426728 | Arabidopsis thaliana |
AT1G07840:three_prime_UTR:1 | 175 | Chr1: 2426132-2426306 | Arabidopsis thaliana |
AT1G07840:three_prime_UTR:2 | 263 | Chr1: 2426414-2426676 | Arabidopsis thaliana |
AT1G07840:three_prime_UTR:3 | 251 | Chr1: 2426426-2426676 | Arabidopsis thaliana |