Genomics
Genome feature
| Region: |
mRNA
|
Length: |
1401
 |
| Location: | Chr1:1639223-1640879 | ||
| Transcript | Exons | Introns | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
AT1G05540.2
AT1G05540.2
1472 |
|
|
||||||||||
|
AT1G05540.1
AT1G05540.1
1401 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05540:CDS:1 |
54
|
Chr1: 1639348-1639401 | Arabidopsis thaliana |
| AT1G05540:CDS:3 |
732
|
Chr1: 1639587-1640318 | Arabidopsis thaliana |
| AT1G05540:CDS:1.1 |
54
|
Chr1: 1639348-1639401 | Arabidopsis thaliana |
| AT1G05540:CDS:2 |
728
|
Chr1: 1639587-1640314 | Arabidopsis thaliana |
| AT1G05540:CDS:4 |
322
|
Chr1: 1640386-1640707 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05540:exon:3 |
1293
|
Chr1: 1639587-1640879 | Arabidopsis thaliana |
| AT1G05540:exon:1 |
179
|
Chr1: 1639223-1639401 | Arabidopsis thaliana |
| AT1G05540:exon:2 |
728
|
Chr1: 1639587-1640314 | Arabidopsis thaliana |
| AT1G05540:exon:4 |
494
|
Chr1: 1640386-1640879 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05540:five_prime_UTR:1 |
125
|
Chr1: 1639223-1639347 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT1G05540 | locus:2201071 | AT1G05540 |
1657
|
Chr1: 1639223-1640879 | A. thaliana | hypothetical protein (DUF295);(source:Araport11) | NULL | Protein of unknown function (DUF295) | AtDOA1 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT1G05540:three_prime_UTR:1 |
561
|
Chr1: 1640319-1640879 | Arabidopsis thaliana |
| AT1G05540:three_prime_UTR:2 |
172
|
Chr1: 1640708-1640879 | Arabidopsis thaliana |
