Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr31
AT1G05490.1
4735 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05490:CDS:3 | 1935 | Chr1: 1618795-1620729 | Arabidopsis thaliana |
AT1G05490:CDS:2 | 150 | Chr1: 1620817-1620966 | Arabidopsis thaliana |
AT1G05490:CDS:1 | 2148 | Chr1: 1621048-1623195 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05490:exon:4 | 2226 | Chr1: 1618504-1620729 | Arabidopsis thaliana |
AT1G05490:exon:3 | 150 | Chr1: 1620817-1620966 | Arabidopsis thaliana |
AT1G05490:exon:2 | 2166 | Chr1: 1621048-1623213 | Arabidopsis thaliana |
AT1G05490:exon:1 | 193 | Chr1: 1623297-1623489 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05490:five_prime_UTR:2 | 18 | Chr1: 1623196-1623213 | Arabidopsis thaliana |
AT1G05490:five_prime_UTR:1 | 193 | Chr1: 1623297-1623489 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G05490 | locus:2201006 | chr31 | chromatin remodeling 31 | 4986 | Chr1: 1618504-1623489 | A. thaliana | chromatin remodeling 31;(source:Araport11) | Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs. | chromatin remodeling 31 | chr31, CLSY3 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05490:three_prime_UTR:1 | 291 | Chr1: 1618504-1618794 | Arabidopsis thaliana |