Genomics
Genome feature
| Region: |
gene
|
Length: |
6081
 |
| Location: | Chr5:7742940-7749020 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
Proteins
Curated comments from UniProt
| Type | Comment | Proteins |
|---|---|---|
| TGH_ARATH TGH_ARATH-2 | function | Functions as a component of microRNA (miRNA) and small interfering RNA (siRNA) biogenesis. May assist DCL1 and DCL4 to efficiently process and/or recruit the precursors of miRNAs and siRNAs. In the miRNA biogenesis pathway, associates with the DCL1 complex that processes primary miRNAs (pri-miRNAs) into miRNAs. Binds pri-miRNAs and precursor miRNAs (pre-miRNAs). Is required for the interaction between pri-miRNAs and DRB1 (PubMed:22802657). Required for general proper plant growth and, in particular, initiation of vascular development. Interacts genetically with AMP1, a glutamate carboxypeptidase involved in the regulation of meristem function (PubMed:16024589). |
| TGH_ARATH TGH_ARATH-2 | subcellular location | Colocalizes with the splicing factor SR34 to subnuclear particles. |
| TGH_ARATH TGH_ARATH-2 | tissue specificity | Expressed in vasculature of cotyledons and leaves, young meristematic tissues, trichomes and pistils. |
Function
Gene Ontology
| cellular component | |
|---|---|
|
nucleus
|
ECO |
|
nuclear speck
|
ECO |
| molecular function | |
|
primary miRNA binding
|
ECO |
|
pre-miRNA binding
|
ECO |
|
RNA binding
|
ECO |
| biological process | |
|
mRNA processing
|
ECO |
|
miRNA processing
|
ECO |
|
siRNA processing
|
ECO |
|
RNA processing
|
ECO |
|
phloem or xylem histogenesis
|
ECO |
Interactions
Interaction Network
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