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Gene : ALC A. thaliana

DB identifier  ? AT5G67110 Secondary Identifier  ? locus:2155503
Name  ? ALCATRAZ Brief Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Computational Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary  encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce.
TAIR Short Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Aliases  ALC

1 Gene Rifs

1 Organism

21 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1326  
Location: Chr5:26785106-26786431 reverse strand

Gene models - ALC AT5G67110

? Gene models

Transcripts: 3  Exons: 13  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ALC_ARATH ALC_ARATH-3 ALC_ARATH-2 function Required for the dehiscence of fruit, especially for the separation of the valve cells from the replum. Promotes the differentiation of a strip of labile nonlignified cells sandwiched between layers of lignified cells.
ALC_ARATH ALC_ARATH-3 ALC_ARATH-2 tissue specificity Expressed constitutively in roots, leaves, stems, and flowers. Confined to the valve margins of the silique.

4 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
protein dimerization activity  ? ECO  
biological process
fruit dehiscence  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets